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Cluster: Rep_461_CGC91

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_34 Rep_461_c_34_16 18705 21380 + GH2
sulfatase Rep_461_c_34 Rep_461_c_34_17 21599 23161 + S1_20
TF Rep_461_c_34 Rep_461_c_34_18 23277 27173 - HTH_AraC
TC Rep_461_c_34 Rep_461_c_34_19 27444 30668 + 1.B.14.6.1
pfam Rep_461_c_34 Rep_461_c_34_20 30697 32520 + SusD_RagB | SusD-like_3
sulfatase Rep_461_c_34 Rep_461_c_34_21 32753 34336 + S1_11
CAZyme Rep_461_c_34 Rep_461_c_34_22 34365 36716 + GH20
CAZyme Rep_461_c_34 Rep_461_c_34_23 36785 39871 + GH2
CAZyme Rep_461_c_34 Rep_461_c_34_24 39894 41765 + CBM32 | GH29
CAZyme Rep_461_c_34 Rep_461_c_34_25 41812 44235 + GH16_3
Gene ID: Rep_461_c_34_16
Type: CAZyme
Location: 18705 - 21380 (+)
Gene ID: Rep_461_c_34_17
Type: sulfatase
Location: 21599 - 23161 (+)
Gene ID: Rep_461_c_34_18
Type: TF
Location: 23277 - 27173 (-)
Gene ID: Rep_461_c_34_19
Type: TC
Location: 27444 - 30668 (+)
Gene ID: Rep_461_c_34_20
Type: pfam
Location: 30697 - 32520 (+)
Gene ID: Rep_461_c_34_21
Type: sulfatase
Location: 32753 - 34336 (+)
Gene ID: Rep_461_c_34_22
Type: CAZyme
Location: 34365 - 36716 (+)
Gene ID: Rep_461_c_34_23
Type: CAZyme
Location: 36785 - 39871 (+)
Gene ID: Rep_461_c_34_24
Type: CAZyme
Location: 39894 - 41765 (+)
Gene ID: Rep_461_c_34_25
Type: CAZyme
Location: 41812 - 44235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_461_c_34_25 vegetarian > omnivore 1.96218 0.00038
Rep_461_c_34_25 vegetarian > vegan 2.84144 0.02765

🧭 Explore Read Mapping of CGC

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