dbCAN Logo

Cluster: Rep_461_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_461_c_10 Rep_461_c_10_77 114821 116410 - 1.B.9.4.2
NULL(UNKNOWN) Rep_461_c_10 Rep_461_c_10_78 116445 117845 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_461_c_10 Rep_461_c_10_79 118130 118972 + PCMT | Ubie_methyltran | MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC Rep_461_c_10 Rep_461_c_10_80 119192 120661 + 4.C.1.1.4
pfam Rep_461_c_10 Rep_461_c_10_81 120673 120915 + PP-binding
TC Rep_461_c_10 Rep_461_c_10_82 120919 122307 + 2.A.50.2.1
NULL(UNKNOWN) Rep_461_c_10 Rep_461_c_10_83 122329 123363 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_461_c_10 Rep_461_c_10_84 123373 124134 - GH25
Gene ID: Rep_461_c_10_77
Type: TC
Location: 114821 - 116410 (-)
Gene ID: Rep_461_c_10_78
Type:
Location: 116445 - 117845 (-)
Gene ID: Rep_461_c_10_79
Type: pfam
Location: 118130 - 118972 (+)
Gene ID: Rep_461_c_10_80
Type: TC
Location: 119192 - 120661 (+)
Gene ID: Rep_461_c_10_81
Type: pfam
Location: 120673 - 120915 (+)
Gene ID: Rep_461_c_10_82
Type: TC
Location: 120919 - 122307 (+)
Gene ID: Rep_461_c_10_83
Type:
Location: 122329 - 123363 (+)
Gene ID: Rep_461_c_10_84
Type: CAZyme
Location: 123373 - 124134 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List