dbCAN Logo

Cluster: Rep_461_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_461_c_7 Rep_461_c_7_138 191517 193055 + 1.C.39.13.3
TC Rep_461_c_7 Rep_461_c_7_139 193295 194293 + 1.C.39.13.3
pfam Rep_461_c_7 Rep_461_c_7_140 194367 195482 - RF-1 | PCRF
peptidase Rep_461_c_7 Rep_461_c_7_141 195596 198514 + M16.UPW
CAZyme Rep_461_c_7 Rep_461_c_7_142 198701 200179 + GH28
CAZyme Rep_461_c_7 Rep_461_c_7_143 200259 202847 - GH3
TC Rep_461_c_7 Rep_461_c_7_144 203043 204893 - 4.C.1.1.14
Gene ID: Rep_461_c_7_138
Type: TC
Location: 191517 - 193055 (+)
Gene ID: Rep_461_c_7_139
Type: TC
Location: 193295 - 194293 (+)
Gene ID: Rep_461_c_7_140
Type: pfam
Location: 194367 - 195482 (-)
Gene ID: Rep_461_c_7_141
Type: peptidase
Location: 195596 - 198514 (+)
Gene ID: Rep_461_c_7_142
Type: CAZyme
Location: 198701 - 200179 (+)
Gene ID: Rep_461_c_7_143
Type: CAZyme
Location: 200259 - 202847 (-)
Gene ID: Rep_461_c_7_144
Type: TC
Location: 203043 - 204893 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_461_c_7_142 vegetarian > omnivore 1.74702 0.00038
Rep_461_c_7_142 vegetarian > vegan 1.02284 0.02765

🧭 Explore Read Mapping of CGC

← Back to Cluster List