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Cluster: Rep_461_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_461_c_7 Rep_461_c_7_112 150887 153925 + 1.B.14.6.1
TC Rep_461_c_7 Rep_461_c_7_113 153993 155513 + 8.A.46.1.3
CAZyme Rep_461_c_7 Rep_461_c_7_114 155532 157880 + GH3
CAZyme Rep_461_c_7 Rep_461_c_7_115 157999 159369 + GH144
STP Rep_461_c_7 Rep_461_c_7_116 159542 162370 + Y_Y_Y
TC Rep_461_c_7 Rep_461_c_7_117 162592 165630 + 1.B.14.6.2
TC Rep_461_c_7 Rep_461_c_7_118 165676 167193 + 8.A.46.1.3
CAZyme Rep_461_c_7 Rep_461_c_7_119 167289 169610 + GH3
pfam Rep_461_c_7 Rep_461_c_7_120 169618 170475 + Exo_endo_phos
CAZyme Rep_461_c_7 Rep_461_c_7_121 170488 171810 + GH144
CAZyme Rep_461_c_7 Rep_461_c_7_122 172173 173387 + CE15
Gene ID: Rep_461_c_7_112
Type: TC
Location: 150887 - 153925 (+)
Gene ID: Rep_461_c_7_113
Type: TC
Location: 153993 - 155513 (+)
Gene ID: Rep_461_c_7_114
Type: CAZyme
Location: 155532 - 157880 (+)
Gene ID: Rep_461_c_7_115
Type: CAZyme
Location: 157999 - 159369 (+)
Gene ID: Rep_461_c_7_116
Type: STP
Location: 159542 - 162370 (+)
Gene ID: Rep_461_c_7_117
Type: TC
Location: 162592 - 165630 (+)
Gene ID: Rep_461_c_7_118
Type: TC
Location: 165676 - 167193 (+)
Gene ID: Rep_461_c_7_119
Type: CAZyme
Location: 167289 - 169610 (+)
Gene ID: Rep_461_c_7_120
Type: pfam
Location: 169618 - 170475 (+)
Gene ID: Rep_461_c_7_121
Type: CAZyme
Location: 170488 - 171810 (+)
Gene ID: Rep_461_c_7_122
Type: CAZyme
Location: 172173 - 173387 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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