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Cluster: Rep_461_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_461_c_7 Rep_461_c_7_31 37962 41144 - 1.B.14.6.1
pfam Rep_461_c_7 Rep_461_c_7_32 41225 42943 - DUF4988
CAZyme Rep_461_c_7 Rep_461_c_7_33 43466 45175 - CBM32 | GH43_28
CAZyme Rep_461_c_7 Rep_461_c_7_34 45172 47496 - GH31_4
CAZyme Rep_461_c_7 Rep_461_c_7_35 47514 50378 - GH3
NULL(UNKNOWN) Rep_461_c_7 Rep_461_c_7_36 50590 53178 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_461_c_7 Rep_461_c_7_37 53308 54543 - GH43_2
CAZyme Rep_461_c_7 Rep_461_c_7_38 54581 57010 - GH95
Gene ID: Rep_461_c_7_31
Type: TC
Location: 37962 - 41144 (-)
Gene ID: Rep_461_c_7_32
Type: pfam
Location: 41225 - 42943 (-)
Gene ID: Rep_461_c_7_33
Type: CAZyme
Location: 43466 - 45175 (-)
Gene ID: Rep_461_c_7_34
Type: CAZyme
Location: 45172 - 47496 (-)
Gene ID: Rep_461_c_7_35
Type: CAZyme
Location: 47514 - 50378 (-)
Gene ID: Rep_461_c_7_36
Type:
Location: 50590 - 53178 (+)
Gene ID: Rep_461_c_7_37
Type: CAZyme
Location: 53308 - 54543 (-)
Gene ID: Rep_461_c_7_38
Type: CAZyme
Location: 54581 - 57010 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_461_c_7_38 vegan > omnivore 1.37817 0.00625
Rep_461_c_7_38 vegetarian > omnivore 1.45894 0.00038

🧭 Explore Read Mapping of CGC

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