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Cluster: Rep_461_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_6 Rep_461_c_6_10 12229 14637 - GH95
CAZyme Rep_461_c_6 Rep_461_c_6_11 14664 16781 - GH31_14
pfam Rep_461_c_6 Rep_461_c_6_12 16809 18173 - Cellulase-like
CAZyme Rep_461_c_6 Rep_461_c_6_13 18359 19900 - GH43_35
pfam Rep_461_c_6 Rep_461_c_6_14 20025 20339 - rhaM
CAZyme Rep_461_c_6 Rep_461_c_6_15 20443 21750 - PL42
CAZyme Rep_461_c_6 Rep_461_c_6_16 21918 23120 - GH88
CAZyme Rep_461_c_6 Rep_461_c_6_17 23573 24661 - GH10
TC Rep_461_c_6 Rep_461_c_6_18 24882 26528 - 8.A.46.1.6
TC Rep_461_c_6 Rep_461_c_6_19 26541 29582 - 1.B.14.6.1
CAZyme Rep_461_c_6 Rep_461_c_6_20 29944 32946 - GH106
Gene ID: Rep_461_c_6_10
Type: CAZyme
Location: 12229 - 14637 (-)
Gene ID: Rep_461_c_6_11
Type: CAZyme
Location: 14664 - 16781 (-)
Gene ID: Rep_461_c_6_12
Type: pfam
Location: 16809 - 18173 (-)
Gene ID: Rep_461_c_6_13
Type: CAZyme
Location: 18359 - 19900 (-)
Gene ID: Rep_461_c_6_14
Type: pfam
Location: 20025 - 20339 (-)
Gene ID: Rep_461_c_6_15
Type: CAZyme
Location: 20443 - 21750 (-)
Gene ID: Rep_461_c_6_16
Type: CAZyme
Location: 21918 - 23120 (-)
Gene ID: Rep_461_c_6_17
Type: CAZyme
Location: 23573 - 24661 (-)
Gene ID: Rep_461_c_6_18
Type: TC
Location: 24882 - 26528 (-)
Gene ID: Rep_461_c_6_19
Type: TC
Location: 26541 - 29582 (-)
Gene ID: Rep_461_c_6_20
Type: CAZyme
Location: 29944 - 32946 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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