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Cluster: Rep_461_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_5 Rep_461_c_5_118 159883 163110 + GH2
pfam Rep_461_c_5 Rep_461_c_5_119 163242 165311 - NosD | Alginate_lyase | Beta_helix
CAZyme Rep_461_c_5 Rep_461_c_5_120 165337 166788 - CE20
NULL(UNKNOWN) Rep_461_c_5 Rep_461_c_5_121 167015 169534 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_461_c_5 Rep_461_c_5_122 169712 171622 + Trehalase | Glyco_hydro_63 | MGH1-like_GH
CAZyme Rep_461_c_5 Rep_461_c_5_123 171635 174442 + GH31_4
NULL(UNKNOWN) Rep_461_c_5 Rep_461_c_5_124 174439 176175 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_461_c_5 Rep_461_c_5_125 176556 179726 + 1.B.14.6.1
pfam Rep_461_c_5 Rep_461_c_5_126 179745 181790 + SusD_RagB | SusD-like_3
pfam Rep_461_c_5 Rep_461_c_5_127 181810 182547 + DUF3823 | DUF3823_C
CAZyme Rep_461_c_5 Rep_461_c_5_128 182979 186668 + GH2
CAZyme Rep_461_c_5 Rep_461_c_5_129 186723 189320 + GH3
CAZyme Rep_461_c_5 Rep_461_c_5_130 189507 192911 + GH2
pfam Rep_461_c_5 Rep_461_c_5_131 192895 195720 + Pect-lyase_RHGA_epim
sulfatase Rep_461_c_5 Rep_461_c_5_132 196228 197520 + S1_15
CAZyme Rep_461_c_5 Rep_461_c_5_133 197524 198921 + CE20
CAZyme Rep_461_c_5 Rep_461_c_5_134 198934 202590 + PL17
CAZyme Rep_461_c_5 Rep_461_c_5_135 202623 204884 + GH92
CAZyme Rep_461_c_5 Rep_461_c_5_136 204892 207252 + GH3
Gene ID: Rep_461_c_5_118
Type: CAZyme
Location: 159883 - 163110 (+)
Gene ID: Rep_461_c_5_119
Type: pfam
Location: 163242 - 165311 (-)
Gene ID: Rep_461_c_5_120
Type: CAZyme
Location: 165337 - 166788 (-)
Gene ID: Rep_461_c_5_121
Type:
Location: 167015 - 169534 (+)
Gene ID: Rep_461_c_5_122
Type: pfam
Location: 169712 - 171622 (+)
Gene ID: Rep_461_c_5_123
Type: CAZyme
Location: 171635 - 174442 (+)
Gene ID: Rep_461_c_5_124
Type:
Location: 174439 - 176175 (+)
Gene ID: Rep_461_c_5_125
Type: TC
Location: 176556 - 179726 (+)
Gene ID: Rep_461_c_5_126
Type: pfam
Location: 179745 - 181790 (+)
Gene ID: Rep_461_c_5_127
Type: pfam
Location: 181810 - 182547 (+)
Gene ID: Rep_461_c_5_128
Type: CAZyme
Location: 182979 - 186668 (+)
Gene ID: Rep_461_c_5_129
Type: CAZyme
Location: 186723 - 189320 (+)
Gene ID: Rep_461_c_5_130
Type: CAZyme
Location: 189507 - 192911 (+)
Gene ID: Rep_461_c_5_131
Type: pfam
Location: 192895 - 195720 (+)
Gene ID: Rep_461_c_5_132
Type: sulfatase
Location: 196228 - 197520 (+)
Gene ID: Rep_461_c_5_133
Type: CAZyme
Location: 197524 - 198921 (+)
Gene ID: Rep_461_c_5_134
Type: CAZyme
Location: 198934 - 202590 (+)
Gene ID: Rep_461_c_5_135
Type: CAZyme
Location: 202623 - 204884 (+)
Gene ID: Rep_461_c_5_136
Type: CAZyme
Location: 204892 - 207252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_461_c_5_132 vegan > omnivore 1.79659 0.00625
Rep_461_c_5_132 vegetarian > omnivore 1.30697 0.00038
Rep_461_c_5_136 vegan > omnivore 1.25063 0.00625

🧭 Explore Read Mapping of CGC

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