Cluster: Rep_461_CGC24
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_461
- CGC Family ID: CGCFAM_10760
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_461_c_4 | Rep_461_c_4_98 | 146885 | 149953 | + | PL8_2 |
| CAZyme | Rep_461_c_4 | Rep_461_c_4_99 | 150046 | 153372 | - | GH106 |
| sulfatase | Rep_461_c_4 | Rep_461_c_4_100 | 153509 | 155170 | - | S1_27 |
| TC | Rep_461_c_4 | Rep_461_c_4_101 | 155190 | 158441 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_461_c_4 | Rep_461_c_4_102 | 158467 | 158604 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_461_c_4 | Rep_461_c_4_103 | 158630 | 162907 | - | HTH_AraC |
| CAZyme | Rep_461_c_4 | Rep_461_c_4_104 | 162970 | 164610 | - | GH28 |
| CAZyme | Rep_461_c_4 | Rep_461_c_4_105 | 164631 | 165632 | - | GH43_24 |
| CAZyme | Rep_461_c_4 | Rep_461_c_4_106 | 165651 | 168062 | - | GH2 |
| pfam | Rep_461_c_4 | Rep_461_c_4_107 | 168415 | 169356 | - | Dus |
| CAZyme | Rep_461_c_4 | Rep_461_c_4_108 | 169390 | 170517 | - | GH117 | GH117 |
| CAZyme | Rep_461_c_4 | Rep_461_c_4_109 | 170536 | 173454 | - | PL8_2 |
| TC | Rep_461_c_4 | Rep_461_c_4_110 | 173585 | 175165 | - | 8.A.46.1.3 |
| TC | Rep_461_c_4 | Rep_461_c_4_111 | 175189 | 178368 | - | 1.B.14.6.1 |
Gene ID: Rep_461_c_4_98
Type: CAZyme
Location: 146885 - 149953 (+)
Type: CAZyme
Location: 146885 - 149953 (+)
Gene ID: Rep_461_c_4_99
Type: CAZyme
Location: 150046 - 153372 (-)
Type: CAZyme
Location: 150046 - 153372 (-)
Gene ID: Rep_461_c_4_100
Type: sulfatase
Location: 153509 - 155170 (-)
Type: sulfatase
Location: 153509 - 155170 (-)
Gene ID: Rep_461_c_4_101
Type: TC
Location: 155190 - 158441 (-)
Type: TC
Location: 155190 - 158441 (-)
Gene ID: Rep_461_c_4_102
Type:
Location: 158467 - 158604 (+)
Type:
Location: 158467 - 158604 (+)
Gene ID: Rep_461_c_4_103
Type: TF
Location: 158630 - 162907 (-)
Type: TF
Location: 158630 - 162907 (-)
Gene ID: Rep_461_c_4_104
Type: CAZyme
Location: 162970 - 164610 (-)
Type: CAZyme
Location: 162970 - 164610 (-)
Gene ID: Rep_461_c_4_105
Type: CAZyme
Location: 164631 - 165632 (-)
Type: CAZyme
Location: 164631 - 165632 (-)
Gene ID: Rep_461_c_4_106
Type: CAZyme
Location: 165651 - 168062 (-)
Type: CAZyme
Location: 165651 - 168062 (-)
Gene ID: Rep_461_c_4_107
Type: pfam
Location: 168415 - 169356 (-)
Type: pfam
Location: 168415 - 169356 (-)
Gene ID: Rep_461_c_4_108
Type: CAZyme
Location: 169390 - 170517 (-)
Type: CAZyme
Location: 169390 - 170517 (-)
Gene ID: Rep_461_c_4_109
Type: CAZyme
Location: 170536 - 173454 (-)
Type: CAZyme
Location: 170536 - 173454 (-)
Gene ID: Rep_461_c_4_110
Type: TC
Location: 173585 - 175165 (-)
Type: TC
Location: 173585 - 175165 (-)
Gene ID: Rep_461_c_4_111
Type: TC
Location: 175189 - 178368 (-)
Type: TC
Location: 175189 - 178368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905207245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.