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Cluster: Rep_461_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_1 Rep_461_c_1_131 177378 178451 - GT4
pfam Rep_461_c_1 Rep_461_c_1_132 178629 178997 - HepT-like
STP Rep_461_c_1 Rep_461_c_1_133 178990 179283 - NTP_transf_2
CAZyme Rep_461_c_1 Rep_461_c_1_134 179323 180453 - GT4
NULL(UNKNOWN) Rep_461_c_1 Rep_461_c_1_135 180450 181553 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_461_c_1 Rep_461_c_1_136 181559 182794 - GT4
NULL(UNKNOWN) Rep_461_c_1 Rep_461_c_1_137 182808 184124 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_461_c_1 Rep_461_c_1_138 184124 185098 - GT2
TC Rep_461_c_1 Rep_461_c_1_139 185095 186114 - 9.B.97.6.2
Gene ID: Rep_461_c_1_131
Type: CAZyme
Location: 177378 - 178451 (-)
Gene ID: Rep_461_c_1_132
Type: pfam
Location: 178629 - 178997 (-)
Gene ID: Rep_461_c_1_133
Type: STP
Location: 178990 - 179283 (-)
Gene ID: Rep_461_c_1_134
Type: CAZyme
Location: 179323 - 180453 (-)
Gene ID: Rep_461_c_1_135
Type:
Location: 180450 - 181553 (-)
Gene ID: Rep_461_c_1_136
Type: CAZyme
Location: 181559 - 182794 (-)
Gene ID: Rep_461_c_1_137
Type:
Location: 182808 - 184124 (-)
Gene ID: Rep_461_c_1_138
Type: CAZyme
Location: 184124 - 185098 (-)
Gene ID: Rep_461_c_1_139
Type: TC
Location: 185095 - 186114 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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