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Cluster: Rep_461_CGC105

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_60 Rep_461_c_60_10 8721 11285 - GT35
CAZyme Rep_461_c_60 Rep_461_c_60_11 11326 12987 - GT3
TC Rep_461_c_60 Rep_461_c_60_12 13348 13812 - 3.A.2.2.2
TC Rep_461_c_60 Rep_461_c_60_13 13857 15662 - 3.A.2.2.2
pfam Rep_461_c_60 Rep_461_c_60_14 15659 16264 - ATP-synt_D
pfam Rep_461_c_60 Rep_461_c_60_15 16334 16690 - 23S_rRNA_IVP
TC Rep_461_c_60 Rep_461_c_60_16 16721 18043 - 3.A.2.3.3
TC Rep_461_c_60 Rep_461_c_60_17 18054 19808 - 3.A.2.3.3
Gene ID: Rep_461_c_60_10
Type: CAZyme
Location: 8721 - 11285 (-)
Gene ID: Rep_461_c_60_11
Type: CAZyme
Location: 11326 - 12987 (-)
Gene ID: Rep_461_c_60_12
Type: TC
Location: 13348 - 13812 (-)
Gene ID: Rep_461_c_60_13
Type: TC
Location: 13857 - 15662 (-)
Gene ID: Rep_461_c_60_14
Type: pfam
Location: 15659 - 16264 (-)
Gene ID: Rep_461_c_60_15
Type: pfam
Location: 16334 - 16690 (-)
Gene ID: Rep_461_c_60_16
Type: TC
Location: 16721 - 18043 (-)
Gene ID: Rep_461_c_60_17
Type: TC
Location: 18054 - 19808 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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