dbCAN HGM

Cluster: Rep_460_CGC50

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_460_c_14	Rep_460_c_14_51	58813	60804	+	2.A.67.4.2
peptidase	Rep_460_c_14	Rep_460_c_14_52	60814	61683	+	S09.UPW
CAZyme	Rep_460_c_14	Rep_460_c_14_53	61699	64914	+	GH2
pfam	Rep_460_c_14	Rep_460_c_14_54	65001	65786	+	AmiA-like
pfam	Rep_460_c_14	Rep_460_c_14_55	65898	67043	-	Aminotran_1_2 \| DegT_DnrJ_EryC1
TC	Rep_460_c_14	Rep_460_c_14_56	67148	67738	-	9.B.18.1.2
pfam	Rep_460_c_14	Rep_460_c_14_57	67743	68264	-	Hexapep_2 \| Hexapep_2
CAZyme	Rep_460_c_14	Rep_460_c_14_58	68268	69023	-	GT2

Gene ID: Rep_460_c_14_51
Type: TC
Location: 58813 - 60804 (+)

Gene ID: Rep_460_c_14_52
Type: peptidase
Location: 60814 - 61683 (+)

Gene ID: Rep_460_c_14_53
Type: CAZyme
Location: 61699 - 64914 (+)

Gene ID: Rep_460_c_14_54
Type: pfam
Location: 65001 - 65786 (+)

Gene ID: Rep_460_c_14_55
Type: pfam
Location: 65898 - 67043 (-)

Gene ID: Rep_460_c_14_56
Type: TC
Location: 67148 - 67738 (-)

Gene ID: Rep_460_c_14_57
Type: pfam
Location: 67743 - 68264 (-)

Gene ID: Rep_460_c_14_58
Type: CAZyme
Location: 68268 - 69023 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_460_c_14_52	vegan > omnivore	1.33070	0.00582
Rep_460_c_14_52	vegetarian > omnivore	1.99797	0.00207
Rep_460_c_14_54	vegan > omnivore	2.46591	0.00582
Rep_460_c_14_54	vegetarian > omnivore	2.67357	0.00207
Rep_460_c_14_55	vegan > omnivore	2.78770	0.00286
Rep_460_c_14_55	vegetarian > omnivore	2.61315	0.00207

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_460_c_14_52	vegan > omnivore	1.08296	0.00035