dbCAN HGM

Cluster: Rep_460_CGC41

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_460_c_10	Rep_460_c_10_6	6165	8162	-	PL12_2
CAZyme	Rep_460_c_10	Rep_460_c_10_7	8179	9468	-	GH88
TC	Rep_460_c_10	Rep_460_c_10_8	9593	11359	-	8.A.46.1.3
TC	Rep_460_c_10	Rep_460_c_10_9	11386	14565	-	1.B.14.6.1
sulfatase	Rep_460_c_10	Rep_460_c_10_10	14808	15929	-	S1_4
TF	Rep_460_c_10	Rep_460_c_10_11	15941	19984	-	HTH_AraC
CAZyme	Rep_460_c_10	Rep_460_c_10_12	20022	21911	-	PL37
sulfatase	Rep_460_c_10	Rep_460_c_10_13	22170	24131	+	S1_8
CAZyme	Rep_460_c_10	Rep_460_c_10_14	24185	25354	+	PL13

Gene ID: Rep_460_c_10_6
Type: CAZyme
Location: 6165 - 8162 (-)

Gene ID: Rep_460_c_10_7
Type: CAZyme
Location: 8179 - 9468 (-)

Gene ID: Rep_460_c_10_8
Type: TC
Location: 9593 - 11359 (-)

Gene ID: Rep_460_c_10_9
Type: TC
Location: 11386 - 14565 (-)

Gene ID: Rep_460_c_10_10
Type: sulfatase
Location: 14808 - 15929 (-)

Gene ID: Rep_460_c_10_11
Type: TF
Location: 15941 - 19984 (-)

Gene ID: Rep_460_c_10_12
Type: CAZyme
Location: 20022 - 21911 (-)

Gene ID: Rep_460_c_10_13
Type: sulfatase
Location: 22170 - 24131 (+)

Gene ID: Rep_460_c_10_14
Type: CAZyme
Location: 24185 - 25354 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_460_c_10_7	vegan > omnivore	1.02491	0.00582
Rep_460_c_10_9	vegan > omnivore	1.00851	0.00582
Rep_460_c_10_13	vegan > omnivore	1.02492	0.00582
Rep_460_c_10_14	vegan > omnivore	1.22881	0.00582

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_460_c_10_8	vegan > flexitarian	1.19797	0.03795
Rep_460_c_10_9	vegan > flexitarian	1.07859	0.03795