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Cluster: Rep_460_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_460_c_8 Rep_460_c_8_72 91653 93206 + GH30_3
pfam Rep_460_c_8 Rep_460_c_8_73 93258 94655 + DUF5016 | DUF5125 | DUF5121
TC Rep_460_c_8 Rep_460_c_8_74 94698 97892 + 1.B.14.6.1
pfam Rep_460_c_8 Rep_460_c_8_75 97913 99889 + SusD_RagB | SusD-like_3
CAZyme Rep_460_c_8 Rep_460_c_8_76 100029 102695 + CBM57 | GH2
CAZyme Rep_460_c_8 Rep_460_c_8_77 102714 105047 + GH88 | PL38
Gene ID: Rep_460_c_8_72
Type: CAZyme
Location: 91653 - 93206 (+)
Gene ID: Rep_460_c_8_73
Type: pfam
Location: 93258 - 94655 (+)
Gene ID: Rep_460_c_8_74
Type: TC
Location: 94698 - 97892 (+)
Gene ID: Rep_460_c_8_75
Type: pfam
Location: 97913 - 99889 (+)
Gene ID: Rep_460_c_8_76
Type: CAZyme
Location: 100029 - 102695 (+)
Gene ID: Rep_460_c_8_77
Type: CAZyme
Location: 102714 - 105047 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_460_c_8_72 vegan > omnivore 2.49115 0.00582
Rep_460_c_8_72 vegetarian > omnivore 2.15083 0.00207
Rep_460_c_8_73 vegan > omnivore 2.30259 0.00582
Rep_460_c_8_73 vegetarian > omnivore 2.35269 0.00207
Rep_460_c_8_74 vegan > omnivore 2.29527 0.00582
Rep_460_c_8_74 vegetarian > omnivore 2.41412 0.00207
Rep_460_c_8_75 vegan > omnivore 2.13203 0.00582
Rep_460_c_8_75 vegetarian > omnivore 2.53787 0.00207
Rep_460_c_8_76 vegan > omnivore 1.87787 0.00582
Rep_460_c_8_76 vegetarian > omnivore 2.54235 0.00207

🧭 Explore Read Mapping of CGC

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