dbCAN HGM

Cluster: Rep_460_CGC36

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_460_c_8	Rep_460_c_8_50	58771	61950	+	1.B.14.6.1
TC	Rep_460_c_8	Rep_460_c_8_51	61974	63554	+	8.A.46.1.3
CAZyme	Rep_460_c_8	Rep_460_c_8_52	63685	66585	+	PL8_2
pfam	Rep_460_c_8	Rep_460_c_8_53	66822	67763	+	Dus
sulfatase	Rep_460_c_8	Rep_460_c_8_54	67773	69140	-	S1_9
CAZyme	Rep_460_c_8	Rep_460_c_8_55	69169	72255	-	PL8_2

Gene ID: Rep_460_c_8_50
Type: TC
Location: 58771 - 61950 (+)

Gene ID: Rep_460_c_8_51
Type: TC
Location: 61974 - 63554 (+)

Gene ID: Rep_460_c_8_52
Type: CAZyme
Location: 63685 - 66585 (+)

Gene ID: Rep_460_c_8_53
Type: pfam
Location: 66822 - 67763 (+)

Gene ID: Rep_460_c_8_54
Type: sulfatase
Location: 67773 - 69140 (-)

Gene ID: Rep_460_c_8_55
Type: CAZyme
Location: 69169 - 72255 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_460_c_8_52	vegan > omnivore	1.08727	0.00582
Rep_460_c_8_52	vegetarian > omnivore	1.58733	0.00207
Rep_460_c_8_53	vegan > omnivore	2.43839	0.00582
Rep_460_c_8_53	vegetarian > omnivore	2.45358	0.00207
Rep_460_c_8_54	vegan > omnivore	1.39194	0.00582
Rep_460_c_8_54	vegetarian > omnivore	1.23822	0.00207

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_460_c_8_52	vegan > omnivore	1.23792	0.00035
Rep_460_c_8_54	vegan > omnivore	1.35957	0.00035