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Cluster: Rep_460_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_460_c_7 Rep_460_c_7_15 16784 19978 + GH38
CAZyme Rep_460_c_7 Rep_460_c_7_16 20130 21530 + GH28
TC Rep_460_c_7 Rep_460_c_7_17 21633 24890 + 1.B.14.6.1
sulfatase Rep_460_c_7 Rep_460_c_7_18 24910 26670 + S1_27
TF Rep_460_c_7 Rep_460_c_7_19 26763 30893 + HTH_AraC
CAZyme Rep_460_c_7 Rep_460_c_7_20 30890 32410 + GH28
CAZyme Rep_460_c_7 Rep_460_c_7_21 32424 33551 + GH26
CAZyme Rep_460_c_7 Rep_460_c_7_22 33668 34411 + CE12
CAZyme Rep_460_c_7 Rep_460_c_7_23 34420 36738 + GH3
Gene ID: Rep_460_c_7_15
Type: CAZyme
Location: 16784 - 19978 (+)
Gene ID: Rep_460_c_7_16
Type: CAZyme
Location: 20130 - 21530 (+)
Gene ID: Rep_460_c_7_17
Type: TC
Location: 21633 - 24890 (+)
Gene ID: Rep_460_c_7_18
Type: sulfatase
Location: 24910 - 26670 (+)
Gene ID: Rep_460_c_7_19
Type: TF
Location: 26763 - 30893 (+)
Gene ID: Rep_460_c_7_20
Type: CAZyme
Location: 30890 - 32410 (+)
Gene ID: Rep_460_c_7_21
Type: CAZyme
Location: 32424 - 33551 (+)
Gene ID: Rep_460_c_7_22
Type: CAZyme
Location: 33668 - 34411 (+)
Gene ID: Rep_460_c_7_23
Type: CAZyme
Location: 34420 - 36738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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