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Cluster: Rep_460_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_460_c_4 Rep_460_c_4_59 101171 102985 - 8.A.46.1.6
TC Rep_460_c_4 Rep_460_c_4_60 103009 106119 - 1.B.14.6.1
NULL(UNKNOWN) Rep_460_c_4 Rep_460_c_4_61 106189 108117 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_460_c_4 Rep_460_c_4_62 108129 110279 - GH67
CAZyme Rep_460_c_4 Rep_460_c_4_63 110293 112239 - GH97
CAZyme Rep_460_c_4 Rep_460_c_4_64 112261 113106 - GH105
NULL(UNKNOWN) Rep_460_c_4 Rep_460_c_4_65 113176 113382 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_460_c_4 Rep_460_c_4_66 113397 114863 - GH125
CAZyme Rep_460_c_4 Rep_460_c_4_67 114895 116097 - GH76
Gene ID: Rep_460_c_4_59
Type: TC
Location: 101171 - 102985 (-)
Gene ID: Rep_460_c_4_60
Type: TC
Location: 103009 - 106119 (-)
Gene ID: Rep_460_c_4_61
Type:
Location: 106189 - 108117 (-)
Gene ID: Rep_460_c_4_62
Type: CAZyme
Location: 108129 - 110279 (-)
Gene ID: Rep_460_c_4_63
Type: CAZyme
Location: 110293 - 112239 (-)
Gene ID: Rep_460_c_4_64
Type: CAZyme
Location: 112261 - 113106 (-)
Gene ID: Rep_460_c_4_65
Type:
Location: 113176 - 113382 (-)
Gene ID: Rep_460_c_4_66
Type: CAZyme
Location: 113397 - 114863 (-)
Gene ID: Rep_460_c_4_67
Type: CAZyme
Location: 114895 - 116097 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_460_c_4_59 vegan > omnivore 2.34684 0.00582

🧭 Explore Read Mapping of CGC

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