dbCAN Logo

Cluster: Rep_460_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_460_c_3 Rep_460_c_3_173 200548 202308 - CBM32 | GH43_28
sulfatase Rep_460_c_3 Rep_460_c_3_174 202305 203873 - S1_11
pfam Rep_460_c_3 Rep_460_c_3_175 203897 204751 - Exo_endo_phos
CAZyme Rep_460_c_3 Rep_460_c_3_176 204764 206071 - GH144
CAZyme Rep_460_c_3 Rep_460_c_3_177 206085 207743 - GH144
pfam Rep_460_c_3 Rep_460_c_3_178 207749 208582 - Laminin_G_3
pfam Rep_460_c_3 Rep_460_c_3_179 208600 210117 - SusD_RagB | SusD-like_3
TC Rep_460_c_3 Rep_460_c_3_180 210150 213125 - 1.B.14.6.1
CAZyme Rep_460_c_3 Rep_460_c_3_181 213413 215704 - GH3
STP Rep_460_c_3 Rep_460_c_3_182 215875 218712 - Y_Y_Y
TC Rep_460_c_3 Rep_460_c_3_183 218842 220515 - 9.B.174.1.1
Gene ID: Rep_460_c_3_173
Type: CAZyme
Location: 200548 - 202308 (-)
Gene ID: Rep_460_c_3_174
Type: sulfatase
Location: 202305 - 203873 (-)
Gene ID: Rep_460_c_3_175
Type: pfam
Location: 203897 - 204751 (-)
Gene ID: Rep_460_c_3_176
Type: CAZyme
Location: 204764 - 206071 (-)
Gene ID: Rep_460_c_3_177
Type: CAZyme
Location: 206085 - 207743 (-)
Gene ID: Rep_460_c_3_178
Type: pfam
Location: 207749 - 208582 (-)
Gene ID: Rep_460_c_3_179
Type: pfam
Location: 208600 - 210117 (-)
Gene ID: Rep_460_c_3_180
Type: TC
Location: 210150 - 213125 (-)
Gene ID: Rep_460_c_3_181
Type: CAZyme
Location: 213413 - 215704 (-)
Gene ID: Rep_460_c_3_182
Type: STP
Location: 215875 - 218712 (-)
Gene ID: Rep_460_c_3_183
Type: TC
Location: 218842 - 220515 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List