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Cluster: Rep_460_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_460_c_2 Rep_460_c_2_53 73148 75748 + GH147
TC Rep_460_c_2 Rep_460_c_2_54 75776 78745 + 1.B.14.6.1
TC Rep_460_c_2 Rep_460_c_2_55 78775 80349 + 8.A.46.1.1
pfam Rep_460_c_2 Rep_460_c_2_56 80361 82106 + SusE | DUF5111 | DUF5114
CAZyme Rep_460_c_2 Rep_460_c_2_57 82240 83313 + GH53
CAZyme Rep_460_c_2 Rep_460_c_2_58 83323 85794 + GH2
TC Rep_460_c_2 Rep_460_c_2_59 86616 89618 + 1.B.14.6.1
TC Rep_460_c_2 Rep_460_c_2_60 89637 91298 + 8.A.46.1.5
Gene ID: Rep_460_c_2_53
Type: CAZyme
Location: 73148 - 75748 (+)
Gene ID: Rep_460_c_2_54
Type: TC
Location: 75776 - 78745 (+)
Gene ID: Rep_460_c_2_55
Type: TC
Location: 78775 - 80349 (+)
Gene ID: Rep_460_c_2_56
Type: pfam
Location: 80361 - 82106 (+)
Gene ID: Rep_460_c_2_57
Type: CAZyme
Location: 82240 - 83313 (+)
Gene ID: Rep_460_c_2_58
Type: CAZyme
Location: 83323 - 85794 (+)
Gene ID: Rep_460_c_2_59
Type: TC
Location: 86616 - 89618 (+)
Gene ID: Rep_460_c_2_60
Type: TC
Location: 89637 - 91298 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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