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Cluster: Rep_460_CGC100

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_460_c_68 Rep_460_c_68_3 1930 3684 + 3.A.2.3.3
TC Rep_460_c_68 Rep_460_c_68_4 3695 5023 + 3.A.2.3.3
pfam Rep_460_c_68 Rep_460_c_68_5 5056 5661 + ATP-synt_D
TC Rep_460_c_68 Rep_460_c_68_6 5658 7493 + 3.A.2.3.3
pfam Rep_460_c_68 Rep_460_c_68_7 7518 7937 + ATP-synt_C | ATP-synt_C
CAZyme Rep_460_c_68 Rep_460_c_68_8 8277 9938 + GT3
CAZyme Rep_460_c_68 Rep_460_c_68_9 9978 12542 + GT35
Gene ID: Rep_460_c_68_3
Type: TC
Location: 1930 - 3684 (+)
Gene ID: Rep_460_c_68_4
Type: TC
Location: 3695 - 5023 (+)
Gene ID: Rep_460_c_68_5
Type: pfam
Location: 5056 - 5661 (+)
Gene ID: Rep_460_c_68_6
Type: TC
Location: 5658 - 7493 (+)
Gene ID: Rep_460_c_68_7
Type: pfam
Location: 7518 - 7937 (+)
Gene ID: Rep_460_c_68_8
Type: CAZyme
Location: 8277 - 9938 (+)
Gene ID: Rep_460_c_68_9
Type: CAZyme
Location: 9978 - 12542 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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