dbCAN HGM

Cluster: Rep_457_CGC99

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_457_c_0	Rep_457_c_0_4441	5959416	5962934	+	1.B.14.6.1
TC	Rep_457_c_0	Rep_457_c_0_4442	5962952	5964952	+	8.A.46.1.3
pfam	Rep_457_c_0	Rep_457_c_0_4443	5964963	5966687	+	fn3 \| DUF5123
CAZyme	Rep_457_c_0	Rep_457_c_0_4444	5966812	5968206	+	PL1_2
CAZyme	Rep_457_c_0	Rep_457_c_0_4445	5968203	5969501	+	GH105

Gene ID: Rep_457_c_0_4441
Type: TC
Location: 5959416 - 5962934 (+)

Gene ID: Rep_457_c_0_4442
Type: TC
Location: 5962952 - 5964952 (+)

Gene ID: Rep_457_c_0_4443
Type: pfam
Location: 5964963 - 5966687 (+)

Gene ID: Rep_457_c_0_4444
Type: CAZyme
Location: 5966812 - 5968206 (+)

Gene ID: Rep_457_c_0_4445
Type: CAZyme
Location: 5968203 - 5969501 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_457_c_0_4441	vegan > omnivore	1.10785	0.01606
Rep_457_c_0_4441	vegetarian > omnivore	1.31375	0.00110
Rep_457_c_0_4442	vegan > omnivore	1.59855	0.01606
Rep_457_c_0_4442	vegetarian > omnivore	2.24486	0.00110
Rep_457_c_0_4443	vegan > omnivore	1.51742	0.01606
Rep_457_c_0_4443	vegetarian > omnivore	2.15460	0.00110
Rep_457_c_0_4444	vegetarian > omnivore	1.73957	0.00110
Rep_457_c_0_4445	vegetarian > omnivore	1.54175	0.00110
Rep_457_c_0_4445	vegetarian > vegan	1.01001	0.02193

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_457_c_0_4444	vegan > omnivore	1.46605	0.00019