Cluster: Rep_457_CGC95
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_4370 | 5849684 | 5853676 | + | 9.A.25.1.1 |
| pfam | Rep_457_c_0 | Rep_457_c_0_4371 | 5853854 | 5854597 | + | DAHP_synth_1 |
| TC | Rep_457_c_0 | Rep_457_c_0_4372 | 5854637 | 5857036 | + | 9.B.14.3.1 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4373 | 5857337 | 5858476 | + | GH105 |
| TF | Rep_457_c_0 | Rep_457_c_0_4374 | 5858518 | 5862606 | + | HTH_AraC |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4375 | 5862756 | 5863979 | + | GH88 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4376 | 5864026 | 5866440 | + | GH2 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4377 | 5866460 | 5867611 | + | PL38 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4378 | 5867624 | 5868931 | + | GH105 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4379 | 5868938 | 5871109 | + | PL8_3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4380 | 5871219 | 5873489 | + | GH95 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4381 | 5873504 | 5875060 | + | PL29 |
| TC | Rep_457_c_0 | Rep_457_c_0_4382 | 5875372 | 5878605 | + | 1.B.14.6.1 |
Gene ID: Rep_457_c_0_4370
Type: TC
Location: 5849684 - 5853676 (+)
Type: TC
Location: 5849684 - 5853676 (+)
Gene ID: Rep_457_c_0_4371
Type: pfam
Location: 5853854 - 5854597 (+)
Type: pfam
Location: 5853854 - 5854597 (+)
Gene ID: Rep_457_c_0_4372
Type: TC
Location: 5854637 - 5857036 (+)
Type: TC
Location: 5854637 - 5857036 (+)
Gene ID: Rep_457_c_0_4373
Type: CAZyme
Location: 5857337 - 5858476 (+)
Type: CAZyme
Location: 5857337 - 5858476 (+)
Gene ID: Rep_457_c_0_4374
Type: TF
Location: 5858518 - 5862606 (+)
Type: TF
Location: 5858518 - 5862606 (+)
Gene ID: Rep_457_c_0_4375
Type: CAZyme
Location: 5862756 - 5863979 (+)
Type: CAZyme
Location: 5862756 - 5863979 (+)
Gene ID: Rep_457_c_0_4376
Type: CAZyme
Location: 5864026 - 5866440 (+)
Type: CAZyme
Location: 5864026 - 5866440 (+)
Gene ID: Rep_457_c_0_4377
Type: CAZyme
Location: 5866460 - 5867611 (+)
Type: CAZyme
Location: 5866460 - 5867611 (+)
Gene ID: Rep_457_c_0_4378
Type: CAZyme
Location: 5867624 - 5868931 (+)
Type: CAZyme
Location: 5867624 - 5868931 (+)
Gene ID: Rep_457_c_0_4379
Type: CAZyme
Location: 5868938 - 5871109 (+)
Type: CAZyme
Location: 5868938 - 5871109 (+)
Gene ID: Rep_457_c_0_4380
Type: CAZyme
Location: 5871219 - 5873489 (+)
Type: CAZyme
Location: 5871219 - 5873489 (+)
Gene ID: Rep_457_c_0_4381
Type: CAZyme
Location: 5873504 - 5875060 (+)
Type: CAZyme
Location: 5873504 - 5875060 (+)
Gene ID: Rep_457_c_0_4382
Type: TC
Location: 5875372 - 5878605 (+)
Type: TC
Location: 5875372 - 5878605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_4370 | vegetarian > vegan | 1.03886 | 0.01997 |
| Rep_457_c_0_4370 | vegan > omnivore | 1.14230 | 0.01606 |
| Rep_457_c_0_4370 | vegetarian > omnivore | 2.18116 | 0.00110 |
| Rep_457_c_0_4371 | vegan > omnivore | 1.65003 | 0.01606 |
| Rep_457_c_0_4371 | vegetarian > omnivore | 2.42896 | 0.00110 |
| Rep_457_c_0_4372 | vegan > omnivore | 1.03376 | 0.01606 |
| Rep_457_c_0_4372 | vegetarian > vegan | 1.16209 | 0.01997 |
| Rep_457_c_0_4372 | vegetarian > omnivore | 2.19585 | 0.00110 |
| Rep_457_c_0_4373 | vegetarian > omnivore | 2.24817 | 0.00110 |
| Rep_457_c_0_4373 | vegetarian > vegan | 1.29737 | 0.02193 |
| Rep_457_c_0_4374 | vegetarian > vegan | 1.03070 | 0.01266 |
| Rep_457_c_0_4374 | vegetarian > omnivore | 2.84643 | 0.00110 |
| Rep_457_c_0_4374 | vegan > omnivore | 1.81573 | 0.01606 |
| Rep_457_c_0_4375 | vegetarian > omnivore | 1.61350 | 0.00110 |
| Rep_457_c_0_4375 | vegan > omnivore | 1.49475 | 0.00450 |
| Rep_457_c_0_4376 | vegetarian > omnivore | 2.63287 | 0.00110 |
| Rep_457_c_0_4376 | vegan > omnivore | 1.85695 | 0.01606 |
| Rep_457_c_0_4377 | vegan > omnivore | 1.75847 | 0.01606 |
| Rep_457_c_0_4377 | vegetarian > omnivore | 1.68407 | 0.00110 |
| Rep_457_c_0_4378 | vegan > omnivore | 1.07504 | 0.01606 |
| Rep_457_c_0_4378 | vegetarian > omnivore | 1.75671 | 0.00110 |
| Rep_457_c_0_4379 | vegan > omnivore | 1.68409 | 0.01606 |
| Rep_457_c_0_4379 | vegetarian > omnivore | 2.26360 | 0.00110 |
| Rep_457_c_0_4380 | vegan > omnivore | 1.66375 | 0.01606 |
| Rep_457_c_0_4380 | vegetarian > omnivore | 2.22831 | 0.00110 |
| Rep_457_c_0_4381 | vegetarian > omnivore | 2.45980 | 0.00110 |
| Rep_457_c_0_4381 | vegan > omnivore | 1.97704 | 0.01606 |