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Cluster: Rep_457_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_457_c_0 Rep_457_c_0_3590 4788675 4791080 - GH127
CAZyme Rep_457_c_0 Rep_457_c_0_3591 4791103 4793505 - CBM32 | GH43_34
CAZyme Rep_457_c_0 Rep_457_c_0_3592 4793573 4796299 - GH97
pfam Rep_457_c_0 Rep_457_c_0_3593 4796766 4797002 - Fic
pfam Rep_457_c_0 Rep_457_c_0_3594 4797035 4797451 - DUF4172
CAZyme Rep_457_c_0 Rep_457_c_0_3595 4797876 4798751 + GH127
CAZyme Rep_457_c_0 Rep_457_c_0_3596 4798748 4799659 + GH127
pfam Rep_457_c_0 Rep_457_c_0_3597 4799604 4800137 + Glyco_hydro127C
TC Rep_457_c_0 Rep_457_c_0_3598 4800264 4800653 + 1.B.14.6.1
Gene ID: Rep_457_c_0_3590
Type: CAZyme
Location: 4788675 - 4791080 (-)
Gene ID: Rep_457_c_0_3591
Type: CAZyme
Location: 4791103 - 4793505 (-)
Gene ID: Rep_457_c_0_3592
Type: CAZyme
Location: 4793573 - 4796299 (-)
Gene ID: Rep_457_c_0_3593
Type: pfam
Location: 4796766 - 4797002 (-)
Gene ID: Rep_457_c_0_3594
Type: pfam
Location: 4797035 - 4797451 (-)
Gene ID: Rep_457_c_0_3595
Type: CAZyme
Location: 4797876 - 4798751 (+)
Gene ID: Rep_457_c_0_3596
Type: CAZyme
Location: 4798748 - 4799659 (+)
Gene ID: Rep_457_c_0_3597
Type: pfam
Location: 4799604 - 4800137 (+)
Gene ID: Rep_457_c_0_3598
Type: TC
Location: 4800264 - 4800653 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_457_c_0_3591 vegetarian > omnivore 1.11615 0.00110
Rep_457_c_0_3596 vegan > omnivore 1.31876 0.01606
Rep_457_c_0_3596 vegetarian > omnivore 1.59133 0.00110

🧭 Explore Read Mapping of CGC

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