Cluster: Rep_457_CGC75
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_00138
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3354 | 4467128 | 4468591 | - | GT2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_3355 | 4468624 | 4470483 | - | Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_3356 | 4470498 | 4473602 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_3357 | 4473625 | 4475073 | - | 2.A.21.3.7 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3358 | 4475108 | 4476274 | - | GH171 |
| pfam | Rep_457_c_0 | Rep_457_c_0_3359 | 4476454 | 4477560 | + | GHL10 | DUF4015 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_3360 | 4477645 | 4478622 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_3361 | 4478769 | 4480421 | - | 8.A.46.2.2 |
| TC | Rep_457_c_0 | Rep_457_c_0_3362 | 4480435 | 4483584 | - | 1.B.14.6.2 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_3363 | 4483703 | 4483828 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_3364 | 4484267 | 4485115 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_3365 | 4485840 | 4489361 | + | 1.B.14.6.1 |
Gene ID: Rep_457_c_0_3354
Type: CAZyme
Location: 4467128 - 4468591 (-)
Type: CAZyme
Location: 4467128 - 4468591 (-)
Gene ID: Rep_457_c_0_3355
Type: pfam
Location: 4468624 - 4470483 (-)
Type: pfam
Location: 4468624 - 4470483 (-)
Gene ID: Rep_457_c_0_3356
Type:
Location: 4470498 - 4473602 (-)
Type:
Location: 4470498 - 4473602 (-)
Gene ID: Rep_457_c_0_3357
Type: TC
Location: 4473625 - 4475073 (-)
Type: TC
Location: 4473625 - 4475073 (-)
Gene ID: Rep_457_c_0_3358
Type: CAZyme
Location: 4475108 - 4476274 (-)
Type: CAZyme
Location: 4475108 - 4476274 (-)
Gene ID: Rep_457_c_0_3359
Type: pfam
Location: 4476454 - 4477560 (+)
Type: pfam
Location: 4476454 - 4477560 (+)
Gene ID: Rep_457_c_0_3360
Type:
Location: 4477645 - 4478622 (-)
Type:
Location: 4477645 - 4478622 (-)
Gene ID: Rep_457_c_0_3361
Type: TC
Location: 4478769 - 4480421 (-)
Type: TC
Location: 4478769 - 4480421 (-)
Gene ID: Rep_457_c_0_3362
Type: TC
Location: 4480435 - 4483584 (-)
Type: TC
Location: 4480435 - 4483584 (-)
Gene ID: Rep_457_c_0_3363
Type:
Location: 4483703 - 4483828 (-)
Type:
Location: 4483703 - 4483828 (-)
Gene ID: Rep_457_c_0_3364
Type:
Location: 4484267 - 4485115 (-)
Type:
Location: 4484267 - 4485115 (-)
Gene ID: Rep_457_c_0_3365
Type: TC
Location: 4485840 - 4489361 (+)
Type: TC
Location: 4485840 - 4489361 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_3359 | vegan > omnivore | 2.43408 | 0.01606 |
| Rep_457_c_0_3359 | vegetarian > omnivore | 2.42593 | 0.00110 |
| Rep_457_c_0_3360 | vegan > omnivore | 1.14747 | 0.01606 |
| Rep_457_c_0_3360 | vegetarian > omnivore | 1.14257 | 0.00110 |
| Rep_457_c_0_3361 | vegan > omnivore | 1.45530 | 0.01606 |
| Rep_457_c_0_3361 | vegetarian > omnivore | 1.77247 | 0.00110 |
| Rep_457_c_0_3363 | vegan > omnivore | 1.78364 | 0.01606 |
| Rep_457_c_0_3363 | vegetarian > omnivore | 1.13907 | 0.00110 |