Cluster: Rep_457_CGC74
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_00275
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3327 | 4421387 | 4422607 | - | CE15 |
| STP | Rep_457_c_0 | Rep_457_c_0_3328 | 4422732 | 4425560 | - | Y_Y_Y |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3329 | 4425758 | 4427080 | - | GH144 |
| pfam | Rep_457_c_0 | Rep_457_c_0_3330 | 4427089 | 4427949 | - | Exo_endo_phos |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3331 | 4427976 | 4430297 | - | GH3 |
| TC | Rep_457_c_0 | Rep_457_c_0_3332 | 4430405 | 4431871 | - | 8.A.46.1.3 |
| TC | Rep_457_c_0 | Rep_457_c_0_3333 | 4431900 | 4434968 | - | 1.B.14.6.1 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3334 | 4435360 | 4436694 | - | GH144 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3335 | 4436729 | 4439083 | - | GH3 |
| pfam | Rep_457_c_0 | Rep_457_c_0_3336 | 4439296 | 4440816 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_457_c_0 | Rep_457_c_0_3337 | 4440851 | 4443889 | - | 1.B.14.6.1 |
Gene ID: Rep_457_c_0_3327
Type: CAZyme
Location: 4421387 - 4422607 (-)
Type: CAZyme
Location: 4421387 - 4422607 (-)
Gene ID: Rep_457_c_0_3328
Type: STP
Location: 4422732 - 4425560 (-)
Type: STP
Location: 4422732 - 4425560 (-)
Gene ID: Rep_457_c_0_3329
Type: CAZyme
Location: 4425758 - 4427080 (-)
Type: CAZyme
Location: 4425758 - 4427080 (-)
Gene ID: Rep_457_c_0_3330
Type: pfam
Location: 4427089 - 4427949 (-)
Type: pfam
Location: 4427089 - 4427949 (-)
Gene ID: Rep_457_c_0_3331
Type: CAZyme
Location: 4427976 - 4430297 (-)
Type: CAZyme
Location: 4427976 - 4430297 (-)
Gene ID: Rep_457_c_0_3332
Type: TC
Location: 4430405 - 4431871 (-)
Type: TC
Location: 4430405 - 4431871 (-)
Gene ID: Rep_457_c_0_3333
Type: TC
Location: 4431900 - 4434968 (-)
Type: TC
Location: 4431900 - 4434968 (-)
Gene ID: Rep_457_c_0_3334
Type: CAZyme
Location: 4435360 - 4436694 (-)
Type: CAZyme
Location: 4435360 - 4436694 (-)
Gene ID: Rep_457_c_0_3335
Type: CAZyme
Location: 4436729 - 4439083 (-)
Type: CAZyme
Location: 4436729 - 4439083 (-)
Gene ID: Rep_457_c_0_3336
Type: pfam
Location: 4439296 - 4440816 (-)
Type: pfam
Location: 4439296 - 4440816 (-)
Gene ID: Rep_457_c_0_3337
Type: TC
Location: 4440851 - 4443889 (-)
Type: TC
Location: 4440851 - 4443889 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_3327 | vegan > omnivore | 1.49528 | 0.01606 |
| Rep_457_c_0_3327 | vegetarian > omnivore | 2.63652 | 0.00110 |
| Rep_457_c_0_3327 | vegetarian > vegan | 1.14124 | 0.02193 |
| Rep_457_c_0_3328 | vegan > omnivore | 1.61265 | 0.01606 |
| Rep_457_c_0_3328 | vegetarian > omnivore | 2.09825 | 0.00110 |