Cluster: Rep_457_CGC73
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_01806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_3310 | 4388460 | 4390310 | + | 4.C.1.1.14 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3311 | 4390489 | 4392507 | + | CBM91 | GH43_10 |
| TF | Rep_457_c_0 | Rep_457_c_0_3312 | 4392501 | 4396817 | - | HTH_AraC |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_3313 | 4396780 | 4397061 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_3314 | 4397094 | 4400417 | + | 1.B.14.6.1 |
| pfam | Rep_457_c_0 | Rep_457_c_0_3315 | 4400441 | 4402465 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3316 | 4402589 | 4405180 | + | GH3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3317 | 4405646 | 4408117 | - | GH95 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3318 | 4408159 | 4409634 | - | GH28 |
Gene ID: Rep_457_c_0_3310
Type: TC
Location: 4388460 - 4390310 (+)
Type: TC
Location: 4388460 - 4390310 (+)
Gene ID: Rep_457_c_0_3311
Type: CAZyme
Location: 4390489 - 4392507 (+)
Type: CAZyme
Location: 4390489 - 4392507 (+)
Gene ID: Rep_457_c_0_3312
Type: TF
Location: 4392501 - 4396817 (-)
Type: TF
Location: 4392501 - 4396817 (-)
Gene ID: Rep_457_c_0_3313
Type:
Location: 4396780 - 4397061 (-)
Type:
Location: 4396780 - 4397061 (-)
Gene ID: Rep_457_c_0_3314
Type: TC
Location: 4397094 - 4400417 (+)
Type: TC
Location: 4397094 - 4400417 (+)
Gene ID: Rep_457_c_0_3315
Type: pfam
Location: 4400441 - 4402465 (+)
Type: pfam
Location: 4400441 - 4402465 (+)
Gene ID: Rep_457_c_0_3316
Type: CAZyme
Location: 4402589 - 4405180 (+)
Type: CAZyme
Location: 4402589 - 4405180 (+)
Gene ID: Rep_457_c_0_3317
Type: CAZyme
Location: 4405646 - 4408117 (-)
Type: CAZyme
Location: 4405646 - 4408117 (-)
Gene ID: Rep_457_c_0_3318
Type: CAZyme
Location: 4408159 - 4409634 (-)
Type: CAZyme
Location: 4408159 - 4409634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_3311 | vegan > omnivore | 2.11442 | 0.01606 |
| Rep_457_c_0_3313 | vegan > omnivore | 1.29554 | 0.01606 |
| Rep_457_c_0_3315 | vegan > omnivore | 2.29724 | 0.01606 |
| Rep_457_c_0_3315 | vegetarian > omnivore | 1.34336 | 0.00110 |
| Rep_457_c_0_3317 | vegan > omnivore | 1.45602 | 0.01606 |
| Rep_457_c_0_3317 | vegetarian > omnivore | 1.05670 | 0.00110 |