Cluster: Rep_457_CGC64
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_05256
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3058 | 4054210 | 4055685 | + | GH30_3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3059 | 4055704 | 4056951 | + | GH5_46 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_3060 | 4057059 | 4059281 | + | GH3 |
| pfam | Rep_457_c_0 | Rep_457_c_0_3061 | 4059600 | 4060034 | - | DUF6078 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_3062 | 4060313 | 4060447 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_3063 | 4060729 | 4061298 | + | 9.B.171.1.2 |
Gene ID: Rep_457_c_0_3058
Type: CAZyme
Location: 4054210 - 4055685 (+)
Type: CAZyme
Location: 4054210 - 4055685 (+)
Gene ID: Rep_457_c_0_3059
Type: CAZyme
Location: 4055704 - 4056951 (+)
Type: CAZyme
Location: 4055704 - 4056951 (+)
Gene ID: Rep_457_c_0_3060
Type: CAZyme
Location: 4057059 - 4059281 (+)
Type: CAZyme
Location: 4057059 - 4059281 (+)
Gene ID: Rep_457_c_0_3061
Type: pfam
Location: 4059600 - 4060034 (-)
Type: pfam
Location: 4059600 - 4060034 (-)
Gene ID: Rep_457_c_0_3062
Type:
Location: 4060313 - 4060447 (-)
Type:
Location: 4060313 - 4060447 (-)
Gene ID: Rep_457_c_0_3063
Type: TC
Location: 4060729 - 4061298 (+)
Type: TC
Location: 4060729 - 4061298 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_3058 | vegan > omnivore | 1.50760 | 0.01606 |
| Rep_457_c_0_3058 | vegetarian > omnivore | 2.16891 | 0.00110 |
| Rep_457_c_0_3061 | vegan > omnivore | 2.13799 | 0.01606 |
| Rep_457_c_0_3061 | vegetarian > omnivore | 2.41969 | 0.00110 |
| Rep_457_c_0_3062 | vegan > omnivore | 1.98171 | 0.01606 |
| Rep_457_c_0_3062 | vegetarian > omnivore | 2.06376 | 0.00110 |
| Rep_457_c_0_3063 | vegan > omnivore | 1.01860 | 0.01606 |
| Rep_457_c_0_3063 | vegetarian > omnivore | 1.09533 | 0.00110 |