Cluster: Rep_457_CGC61
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_2905 | 3819737 | 3821545 | - | 8.A.46.1.6 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_2906 | 3821574 | 3822539 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_2907 | 3822500 | 3824683 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_2908 | 3824753 | 3826681 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2909 | 3826692 | 3828842 | - | GH67 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2910 | 3828858 | 3830804 | - | GH97 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2911 | 3830826 | 3831947 | - | GH105 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2912 | 3831962 | 3833428 | - | GH125 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2913 | 3833458 | 3834657 | - | GH76 |
| sulfatase | Rep_457_c_0 | Rep_457_c_0_2914 | 3835148 | 3836206 | - | S1_17 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2915 | 3836226 | 3839330 | - | GH2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2916 | 3839335 | 3840957 | - | Glyco_hydro_35 | Glyco_hydro_42 | DUF4969 | DUF4978 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2917 | 3841011 | 3843017 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_457_c_0 | Rep_457_c_0_2918 | 3843065 | 3846328 | - | 1.B.14.6.1 |
Gene ID: Rep_457_c_0_2905
Type: TC
Location: 3819737 - 3821545 (-)
Type: TC
Location: 3819737 - 3821545 (-)
Gene ID: Rep_457_c_0_2906
Type:
Location: 3821574 - 3822539 (-)
Type:
Location: 3821574 - 3822539 (-)
Gene ID: Rep_457_c_0_2907
Type: TC
Location: 3822500 - 3824683 (-)
Type: TC
Location: 3822500 - 3824683 (-)
Gene ID: Rep_457_c_0_2908
Type:
Location: 3824753 - 3826681 (-)
Type:
Location: 3824753 - 3826681 (-)
Gene ID: Rep_457_c_0_2909
Type: CAZyme
Location: 3826692 - 3828842 (-)
Type: CAZyme
Location: 3826692 - 3828842 (-)
Gene ID: Rep_457_c_0_2910
Type: CAZyme
Location: 3828858 - 3830804 (-)
Type: CAZyme
Location: 3828858 - 3830804 (-)
Gene ID: Rep_457_c_0_2911
Type: CAZyme
Location: 3830826 - 3831947 (-)
Type: CAZyme
Location: 3830826 - 3831947 (-)
Gene ID: Rep_457_c_0_2912
Type: CAZyme
Location: 3831962 - 3833428 (-)
Type: CAZyme
Location: 3831962 - 3833428 (-)
Gene ID: Rep_457_c_0_2913
Type: CAZyme
Location: 3833458 - 3834657 (-)
Type: CAZyme
Location: 3833458 - 3834657 (-)
Gene ID: Rep_457_c_0_2914
Type: sulfatase
Location: 3835148 - 3836206 (-)
Type: sulfatase
Location: 3835148 - 3836206 (-)
Gene ID: Rep_457_c_0_2915
Type: CAZyme
Location: 3836226 - 3839330 (-)
Type: CAZyme
Location: 3836226 - 3839330 (-)
Gene ID: Rep_457_c_0_2916
Type: pfam
Location: 3839335 - 3840957 (-)
Type: pfam
Location: 3839335 - 3840957 (-)
Gene ID: Rep_457_c_0_2917
Type: pfam
Location: 3841011 - 3843017 (-)
Type: pfam
Location: 3841011 - 3843017 (-)
Gene ID: Rep_457_c_0_2918
Type: TC
Location: 3843065 - 3846328 (-)
Type: TC
Location: 3843065 - 3846328 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_2905 | vegan > omnivore | 2.11683 | 0.01606 |