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Cluster: Rep_457_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_457_c_0 Rep_457_c_0_489 600644 601537 - GT2
CAZyme Rep_457_c_0 Rep_457_c_0_490 601527 602645 - GT4
CAZyme Rep_457_c_0 Rep_457_c_0_491 602630 603676 - GT2
CAZyme Rep_457_c_0 Rep_457_c_0_492 603678 604532 - GT2
CAZyme Rep_457_c_0 Rep_457_c_0_493 604536 605687 - GT4
TC Rep_457_c_0 Rep_457_c_0_494 605700 607118 - 2.A.66.2.23
pfam Rep_457_c_0 Rep_457_c_0_495 607234 609006 - Asn_synthase
CAZyme Rep_457_c_0 Rep_457_c_0_496 609014 610195 - GT2
Gene ID: Rep_457_c_0_489
Type: CAZyme
Location: 600644 - 601537 (-)
Gene ID: Rep_457_c_0_490
Type: CAZyme
Location: 601527 - 602645 (-)
Gene ID: Rep_457_c_0_491
Type: CAZyme
Location: 602630 - 603676 (-)
Gene ID: Rep_457_c_0_492
Type: CAZyme
Location: 603678 - 604532 (-)
Gene ID: Rep_457_c_0_493
Type: CAZyme
Location: 604536 - 605687 (-)
Gene ID: Rep_457_c_0_494
Type: TC
Location: 605700 - 607118 (-)
Gene ID: Rep_457_c_0_495
Type: pfam
Location: 607234 - 609006 (-)
Gene ID: Rep_457_c_0_496
Type: CAZyme
Location: 609014 - 610195 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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