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Cluster: Rep_457_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_457_c_0 Rep_457_c_0_362 425942 427396 + 2.A.36.6.3
sulfatase Rep_457_c_0 Rep_457_c_0_363 427938 429602 + S1_2
CAZyme Rep_457_c_0 Rep_457_c_0_364 429783 431807 - GH65
pfam Rep_457_c_0 Rep_457_c_0_365 431909 432619 + DUF169
pfam Rep_457_c_0 Rep_457_c_0_366 432863 433519 + DUF4919
CAZyme Rep_457_c_0 Rep_457_c_0_367 433613 435766 - GH97
CAZyme Rep_457_c_0 Rep_457_c_0_368 435790 438288 - GH31
CAZyme Rep_457_c_0 Rep_457_c_0_369 438309 440099 - GH66
pfam Rep_457_c_0 Rep_457_c_0_370 440104 441600 - SusE | SusF_SusE | SusF_SusE
TC Rep_457_c_0 Rep_457_c_0_371 441623 443113 - 8.A.46.1.5
TC Rep_457_c_0 Rep_457_c_0_372 443125 446124 - 1.B.14.6.1
Gene ID: Rep_457_c_0_362
Type: TC
Location: 425942 - 427396 (+)
Gene ID: Rep_457_c_0_363
Type: sulfatase
Location: 427938 - 429602 (+)
Gene ID: Rep_457_c_0_364
Type: CAZyme
Location: 429783 - 431807 (-)
Gene ID: Rep_457_c_0_365
Type: pfam
Location: 431909 - 432619 (+)
Gene ID: Rep_457_c_0_366
Type: pfam
Location: 432863 - 433519 (+)
Gene ID: Rep_457_c_0_367
Type: CAZyme
Location: 433613 - 435766 (-)
Gene ID: Rep_457_c_0_368
Type: CAZyme
Location: 435790 - 438288 (-)
Gene ID: Rep_457_c_0_369
Type: CAZyme
Location: 438309 - 440099 (-)
Gene ID: Rep_457_c_0_370
Type: pfam
Location: 440104 - 441600 (-)
Gene ID: Rep_457_c_0_371
Type: TC
Location: 441623 - 443113 (-)
Gene ID: Rep_457_c_0_372
Type: TC
Location: 443125 - 446124 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_457_c_0_364 vegan > omnivore 1.05901 0.01606
Rep_457_c_0_364 vegetarian > omnivore 2.16961 0.00110
Rep_457_c_0_364 vegetarian > vegan 1.11059 0.02135

🧭 Explore Read Mapping of CGC

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