Cluster: Rep_457_CGC47
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 11
- Substrate:
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_08080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_2484 | 3191502 | 3194849 | + | 1.B.14.6.1 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2485 | 3194874 | 3196424 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2486 | 3196501 | 3198573 | + | GH92 | GH92 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2487 | 3198579 | 3200792 | + | GH92 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2488 | 3200795 | 3202255 | + | GH28 |
| sulfatase | Rep_457_c_0 | Rep_457_c_0_2489 | 3202264 | 3204123 | + | S1_24 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2490 | 3204136 | 3205623 | + | GH28 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2491 | 3205626 | 3208718 | + | GH2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2492 | 3209108 | 3210175 | - | PHP |
| pfam | Rep_457_c_0 | Rep_457_c_0_2493 | 3210208 | 3211722 | - | ADP_ribosyl_GH |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2494 | 3211731 | 3213653 | - | GH172 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2495 | 3213681 | 3214562 | - | Metallophos |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2496 | 3214672 | 3215871 | - | GH172 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2497 | 3215882 | 3216865 | - | GH32 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2498 | 3216878 | 3218026 | - | GH26 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_2499 | 3218084 | 3220159 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2500 | 3220173 | 3221333 | - | GH172 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_2501 | 3221486 | 3222658 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_457_c_0 | Rep_457_c_0_2502 | 3222678 | 3224381 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_457_c_0 | Rep_457_c_0_2503 | 3224402 | 3227215 | - | 1.B.14.6.2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2504 | 3227241 | 3229286 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_457_c_0 | Rep_457_c_0_2505 | 3229297 | 3232476 | - | 1.B.14.6.1 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2506 | 3232715 | 3233899 | - | GH172 |
| TC | Rep_457_c_0 | Rep_457_c_0_2507 | 3233928 | 3235361 | - | 2.A.1.7.1 |
Gene ID: Rep_457_c_0_2484
Type: TC
Location: 3191502 - 3194849 (+)
Type: TC
Location: 3191502 - 3194849 (+)
Gene ID: Rep_457_c_0_2485
Type: pfam
Location: 3194874 - 3196424 (+)
Type: pfam
Location: 3194874 - 3196424 (+)
Gene ID: Rep_457_c_0_2486
Type: CAZyme
Location: 3196501 - 3198573 (+)
Type: CAZyme
Location: 3196501 - 3198573 (+)
Gene ID: Rep_457_c_0_2487
Type: CAZyme
Location: 3198579 - 3200792 (+)
Type: CAZyme
Location: 3198579 - 3200792 (+)
Gene ID: Rep_457_c_0_2488
Type: CAZyme
Location: 3200795 - 3202255 (+)
Type: CAZyme
Location: 3200795 - 3202255 (+)
Gene ID: Rep_457_c_0_2489
Type: sulfatase
Location: 3202264 - 3204123 (+)
Type: sulfatase
Location: 3202264 - 3204123 (+)
Gene ID: Rep_457_c_0_2490
Type: CAZyme
Location: 3204136 - 3205623 (+)
Type: CAZyme
Location: 3204136 - 3205623 (+)
Gene ID: Rep_457_c_0_2491
Type: CAZyme
Location: 3205626 - 3208718 (+)
Type: CAZyme
Location: 3205626 - 3208718 (+)
Gene ID: Rep_457_c_0_2492
Type: pfam
Location: 3209108 - 3210175 (-)
Type: pfam
Location: 3209108 - 3210175 (-)
Gene ID: Rep_457_c_0_2493
Type: pfam
Location: 3210208 - 3211722 (-)
Type: pfam
Location: 3210208 - 3211722 (-)
Gene ID: Rep_457_c_0_2494
Type: CAZyme
Location: 3211731 - 3213653 (-)
Type: CAZyme
Location: 3211731 - 3213653 (-)
Gene ID: Rep_457_c_0_2495
Type: pfam
Location: 3213681 - 3214562 (-)
Type: pfam
Location: 3213681 - 3214562 (-)
Gene ID: Rep_457_c_0_2496
Type: CAZyme
Location: 3214672 - 3215871 (-)
Type: CAZyme
Location: 3214672 - 3215871 (-)
Gene ID: Rep_457_c_0_2497
Type: CAZyme
Location: 3215882 - 3216865 (-)
Type: CAZyme
Location: 3215882 - 3216865 (-)
Gene ID: Rep_457_c_0_2498
Type: CAZyme
Location: 3216878 - 3218026 (-)
Type: CAZyme
Location: 3216878 - 3218026 (-)
Gene ID: Rep_457_c_0_2499
Type:
Location: 3218084 - 3220159 (-)
Type:
Location: 3218084 - 3220159 (-)
Gene ID: Rep_457_c_0_2500
Type: CAZyme
Location: 3220173 - 3221333 (-)
Type: CAZyme
Location: 3220173 - 3221333 (-)
Gene ID: Rep_457_c_0_2501
Type:
Location: 3221486 - 3222658 (-)
Type:
Location: 3221486 - 3222658 (-)
Gene ID: Rep_457_c_0_2502
Type: pfam
Location: 3222678 - 3224381 (-)
Type: pfam
Location: 3222678 - 3224381 (-)
Gene ID: Rep_457_c_0_2503
Type: TC
Location: 3224402 - 3227215 (-)
Type: TC
Location: 3224402 - 3227215 (-)
Gene ID: Rep_457_c_0_2504
Type: pfam
Location: 3227241 - 3229286 (-)
Type: pfam
Location: 3227241 - 3229286 (-)
Gene ID: Rep_457_c_0_2505
Type: TC
Location: 3229297 - 3232476 (-)
Type: TC
Location: 3229297 - 3232476 (-)
Gene ID: Rep_457_c_0_2506
Type: CAZyme
Location: 3232715 - 3233899 (-)
Type: CAZyme
Location: 3232715 - 3233899 (-)
Gene ID: Rep_457_c_0_2507
Type: TC
Location: 3233928 - 3235361 (-)
Type: TC
Location: 3233928 - 3235361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_2487 | vegan > omnivore | 1.52394 | 0.01606 |
| Rep_457_c_0_2496 | vegan > omnivore | 2.29222 | 0.01606 |
| Rep_457_c_0_2498 | vegetarian > omnivore | 3.18440 | 0.00110 |
| Rep_457_c_0_2498 | vegan > omnivore | 3.69583 | 0.01606 |
| Rep_457_c_0_2499 | vegetarian > omnivore | 1.40750 | 0.00110 |
| Rep_457_c_0_2499 | vegan > omnivore | 2.11580 | 0.01606 |
| Rep_457_c_0_2502 | vegetarian > omnivore | 2.02148 | 0.00110 |
| Rep_457_c_0_2502 | vegan > omnivore | 2.39469 | 0.01606 |
| Rep_457_c_0_2503 | vegetarian > omnivore | 2.99357 | 0.00110 |
| Rep_457_c_0_2503 | vegan > omnivore | 3.16342 | 0.01606 |
| Rep_457_c_0_2504 | vegan > omnivore | 2.48505 | 0.01606 |
| Rep_457_c_0_2504 | vegetarian > omnivore | 2.61608 | 0.00110 |
| Rep_457_c_0_2505 | vegan > omnivore | 2.42670 | 0.01606 |
| Rep_457_c_0_2505 | vegetarian > omnivore | 2.20673 | 0.00110 |
| Rep_457_c_0_2506 | vegan > omnivore | 1.93284 | 0.01606 |
| Rep_457_c_0_2506 | vegetarian > omnivore | 1.78297 | 0.00110 |