Cluster: Rep_457_CGC43
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2301 | 2930060 | 2931784 | - | CBM32 | GH43_28 |
| sulfatase | Rep_457_c_0 | Rep_457_c_0_2302 | 2931801 | 2933369 | - | S1_11 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2303 | 2933374 | 2934228 | - | Exo_endo_phos |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2304 | 2934244 | 2935554 | - | GH144 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2305 | 2935570 | 2937234 | - | GH144 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2306 | 2937234 | 2938073 | - | Laminin_G_3 |
| pfam | Rep_457_c_0 | Rep_457_c_0_2307 | 2938085 | 2939602 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_457_c_0 | Rep_457_c_0_2308 | 2939635 | 2942610 | - | 1.B.14.6.1 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_2309 | 2942843 | 2945134 | - | GH3 |
| STP | Rep_457_c_0 | Rep_457_c_0_2310 | 2945305 | 2948142 | - | Y_Y_Y |
| TC | Rep_457_c_0 | Rep_457_c_0_2311 | 2948290 | 2950047 | - | 9.B.174.1.1 |
Gene ID: Rep_457_c_0_2301
Type: CAZyme
Location: 2930060 - 2931784 (-)
Type: CAZyme
Location: 2930060 - 2931784 (-)
Gene ID: Rep_457_c_0_2302
Type: sulfatase
Location: 2931801 - 2933369 (-)
Type: sulfatase
Location: 2931801 - 2933369 (-)
Gene ID: Rep_457_c_0_2303
Type: pfam
Location: 2933374 - 2934228 (-)
Type: pfam
Location: 2933374 - 2934228 (-)
Gene ID: Rep_457_c_0_2304
Type: CAZyme
Location: 2934244 - 2935554 (-)
Type: CAZyme
Location: 2934244 - 2935554 (-)
Gene ID: Rep_457_c_0_2305
Type: CAZyme
Location: 2935570 - 2937234 (-)
Type: CAZyme
Location: 2935570 - 2937234 (-)
Gene ID: Rep_457_c_0_2306
Type: pfam
Location: 2937234 - 2938073 (-)
Type: pfam
Location: 2937234 - 2938073 (-)
Gene ID: Rep_457_c_0_2307
Type: pfam
Location: 2938085 - 2939602 (-)
Type: pfam
Location: 2938085 - 2939602 (-)
Gene ID: Rep_457_c_0_2308
Type: TC
Location: 2939635 - 2942610 (-)
Type: TC
Location: 2939635 - 2942610 (-)
Gene ID: Rep_457_c_0_2309
Type: CAZyme
Location: 2942843 - 2945134 (-)
Type: CAZyme
Location: 2942843 - 2945134 (-)
Gene ID: Rep_457_c_0_2310
Type: STP
Location: 2945305 - 2948142 (-)
Type: STP
Location: 2945305 - 2948142 (-)
Gene ID: Rep_457_c_0_2311
Type: TC
Location: 2948290 - 2950047 (-)
Type: TC
Location: 2948290 - 2950047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_2302 | vegan > omnivore | 1.02541 | 0.01606 |
| Rep_457_c_0_2303 | vegan > omnivore | 1.05861 | 0.01606 |
| Rep_457_c_0_2303 | vegetarian > omnivore | 1.82547 | 0.00110 |
| Rep_457_c_0_2304 | vegan > omnivore | 1.40376 | 0.01606 |
| Rep_457_c_0_2305 | vegan > omnivore | 1.04494 | 0.01606 |
| Rep_457_c_0_2306 | vegan > omnivore | 1.34976 | 0.01606 |
| Rep_457_c_0_2306 | vegetarian > omnivore | 1.66349 | 0.00110 |
| Rep_457_c_0_2307 | vegan > omnivore | 2.10409 | 0.01606 |
| Rep_457_c_0_2307 | vegetarian > omnivore | 2.58411 | 0.00110 |
| Rep_457_c_0_2310 | vegan > omnivore | 1.57222 | 0.01606 |
| Rep_457_c_0_2310 | vegetarian > omnivore | 1.53619 | 0.00110 |