Cluster: Rep_457_CGC31

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_457_c_0	Rep_457_c_0_1543	1930539	1932143	+	GH28
CAZyme	Rep_457_c_0	Rep_457_c_0_1544	1932166	1936035	+	CBM67 \| GH33 \| GH78
pfam	Rep_457_c_0	Rep_457_c_0_1545	1936129	1937349	+	DUF4861
CAZyme	Rep_457_c_0	Rep_457_c_0_1546	1937416	1939098	+	CBM91 \| GH43_10
NULL(UNKNOWN)	Rep_457_c_0	Rep_457_c_0_1547	1938973	1939239	-	NULL(UNKNOWN) [View Structural Homologs]
pfam	Rep_457_c_0	Rep_457_c_0_1548	1939386	1940117	+	Hydrolase \| HAD \| Hydrolase_like \| HAD_2
CAZyme	Rep_457_c_0	Rep_457_c_0_1549	1940283	1942763	+	GH95
TC	Rep_457_c_0	Rep_457_c_0_1550	1943046	1946267	+	1.B.14.6.1

Gene ID: Rep_457_c_0_1543
Type: CAZyme
Location: 1930539 - 1932143 (+)

Gene ID: Rep_457_c_0_1544
Type: CAZyme
Location: 1932166 - 1936035 (+)

Gene ID: Rep_457_c_0_1545
Type: pfam
Location: 1936129 - 1937349 (+)

Gene ID: Rep_457_c_0_1546
Type: CAZyme
Location: 1937416 - 1939098 (+)

Gene ID: Rep_457_c_0_1547
Type:
Location: 1938973 - 1939239 (-)

Gene ID: Rep_457_c_0_1548
Type: pfam
Location: 1939386 - 1940117 (+)

Gene ID: Rep_457_c_0_1549
Type: CAZyme
Location: 1940283 - 1942763 (+)

Gene ID: Rep_457_c_0_1550
Type: TC
Location: 1943046 - 1946267 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_457_c_0_1544	vegan > omnivore	1.42363	0.01606
Rep_457_c_0_1544	vegetarian > omnivore	1.68388	0.00110
Rep_457_c_0_1545	vegan > omnivore	1.05451	0.01606
Rep_457_c_0_1545	vegetarian > omnivore	1.97062	0.00110
Rep_457_c_0_1547	vegan > omnivore	1.41307	0.01606
Rep_457_c_0_1547	vegetarian > omnivore	1.75942	0.00110
Rep_457_c_0_1548	vegan > omnivore	1.36878	0.01606
Rep_457_c_0_1548	vegetarian > omnivore	1.31706	0.00110