Cluster: Rep_457_CGC30
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_01821
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_1512 | 1879736 | 1881745 | - | 8.A.46.1.3 |
| TC | Rep_457_c_0 | Rep_457_c_0_1513 | 1881766 | 1885008 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_1514 | 1885072 | 1885779 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_457_c_0 | Rep_457_c_0_1515 | 1886170 | 1890615 | + | HTH_AraC |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1516 | 1890644 | 1893238 | - | GH3 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1517 | 1893444 | 1895090 | - | DUF4957 | DUF5123 |
| sulfatase | Rep_457_c_0 | Rep_457_c_0_1518 | 1895118 | 1897193 | - | S1_27 |
| TC | Rep_457_c_0 | Rep_457_c_0_1519 | 1897206 | 1900460 | - | 1.B.14.6.1 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1520 | 1900722 | 1902023 | - | CE8 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1521 | 1902053 | 1903603 | - | PL1_2 |
Gene ID: Rep_457_c_0_1512
Type: TC
Location: 1879736 - 1881745 (-)
Type: TC
Location: 1879736 - 1881745 (-)
Gene ID: Rep_457_c_0_1513
Type: TC
Location: 1881766 - 1885008 (-)
Type: TC
Location: 1881766 - 1885008 (-)
Gene ID: Rep_457_c_0_1514
Type:
Location: 1885072 - 1885779 (-)
Type:
Location: 1885072 - 1885779 (-)
Gene ID: Rep_457_c_0_1515
Type: TF
Location: 1886170 - 1890615 (+)
Type: TF
Location: 1886170 - 1890615 (+)
Gene ID: Rep_457_c_0_1516
Type: CAZyme
Location: 1890644 - 1893238 (-)
Type: CAZyme
Location: 1890644 - 1893238 (-)
Gene ID: Rep_457_c_0_1517
Type: pfam
Location: 1893444 - 1895090 (-)
Type: pfam
Location: 1893444 - 1895090 (-)
Gene ID: Rep_457_c_0_1518
Type: sulfatase
Location: 1895118 - 1897193 (-)
Type: sulfatase
Location: 1895118 - 1897193 (-)
Gene ID: Rep_457_c_0_1519
Type: TC
Location: 1897206 - 1900460 (-)
Type: TC
Location: 1897206 - 1900460 (-)
Gene ID: Rep_457_c_0_1520
Type: CAZyme
Location: 1900722 - 1902023 (-)
Type: CAZyme
Location: 1900722 - 1902023 (-)
Gene ID: Rep_457_c_0_1521
Type: CAZyme
Location: 1902053 - 1903603 (-)
Type: CAZyme
Location: 1902053 - 1903603 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.