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Cluster: Rep_457_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_457_c_0 Rep_457_c_0_259 293693 294802 + GT4
CAZyme Rep_457_c_0 Rep_457_c_0_260 294799 296001 + GT4
pfam Rep_457_c_0 Rep_457_c_0_261 296039 297061 + Radical_SAM | SPASM
CAZyme Rep_457_c_0 Rep_457_c_0_262 297058 298155 + GT4
TC Rep_457_c_0 Rep_457_c_0_263 298212 298832 + 9.B.18.1.1
Gene ID: Rep_457_c_0_259
Type: CAZyme
Location: 293693 - 294802 (+)
Gene ID: Rep_457_c_0_260
Type: CAZyme
Location: 294799 - 296001 (+)
Gene ID: Rep_457_c_0_261
Type: pfam
Location: 296039 - 297061 (+)
Gene ID: Rep_457_c_0_262
Type: CAZyme
Location: 297058 - 298155 (+)
Gene ID: Rep_457_c_0_263
Type: TC
Location: 298212 - 298832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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