Cluster: Rep_457_CGC27
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 7
- Substrate: host glycan
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_00016
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1365 | 1709085 | 1711379 | - | GH92 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1366 | 1711406 | 1712377 | - | GH130_2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1367 | 1712407 | 1713714 | - | BT1 | MFS_1 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1368 | 1713728 | 1715992 | - | GH92 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1369 | 1716018 | 1718033 | - | GH97 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1370 | 1718049 | 1718903 | - | Exo_endo_phos |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_1371 | 1718999 | 1719997 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1372 | 1720034 | 1721464 | - | GH18 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1373 | 1721494 | 1722639 | - | Pentaxin | BT_3987-like_N | Laminin_G_3 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1374 | 1722656 | 1723690 | - | GH18_BT1044-like |
| TC | Rep_457_c_0 | Rep_457_c_0_1375 | 1723711 | 1725297 | - | 8.A.46.2.2 |
| TC | Rep_457_c_0 | Rep_457_c_0_1376 | 1725310 | 1728699 | - | 1.B.14.6.13 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1377 | 1728890 | 1731169 | - | GH92 |
| STP | Rep_457_c_0 | Rep_457_c_0_1378 | 1731208 | 1732218 | - | FecR |
| TF | Rep_457_c_0 | Rep_457_c_0_1379 | 1732250 | 1732810 | - | GerE |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1380 | 1732859 | 1735093 | - | GH92 |
Gene ID: Rep_457_c_0_1365
Type: CAZyme
Location: 1709085 - 1711379 (-)
Type: CAZyme
Location: 1709085 - 1711379 (-)
Gene ID: Rep_457_c_0_1366
Type: CAZyme
Location: 1711406 - 1712377 (-)
Type: CAZyme
Location: 1711406 - 1712377 (-)
Gene ID: Rep_457_c_0_1367
Type: pfam
Location: 1712407 - 1713714 (-)
Type: pfam
Location: 1712407 - 1713714 (-)
Gene ID: Rep_457_c_0_1368
Type: CAZyme
Location: 1713728 - 1715992 (-)
Type: CAZyme
Location: 1713728 - 1715992 (-)
Gene ID: Rep_457_c_0_1369
Type: CAZyme
Location: 1716018 - 1718033 (-)
Type: CAZyme
Location: 1716018 - 1718033 (-)
Gene ID: Rep_457_c_0_1370
Type: pfam
Location: 1718049 - 1718903 (-)
Type: pfam
Location: 1718049 - 1718903 (-)
Gene ID: Rep_457_c_0_1371
Type:
Location: 1718999 - 1719997 (-)
Type:
Location: 1718999 - 1719997 (-)
Gene ID: Rep_457_c_0_1372
Type: CAZyme
Location: 1720034 - 1721464 (-)
Type: CAZyme
Location: 1720034 - 1721464 (-)
Gene ID: Rep_457_c_0_1373
Type: pfam
Location: 1721494 - 1722639 (-)
Type: pfam
Location: 1721494 - 1722639 (-)
Gene ID: Rep_457_c_0_1374
Type: pfam
Location: 1722656 - 1723690 (-)
Type: pfam
Location: 1722656 - 1723690 (-)
Gene ID: Rep_457_c_0_1375
Type: TC
Location: 1723711 - 1725297 (-)
Type: TC
Location: 1723711 - 1725297 (-)
Gene ID: Rep_457_c_0_1376
Type: TC
Location: 1725310 - 1728699 (-)
Type: TC
Location: 1725310 - 1728699 (-)
Gene ID: Rep_457_c_0_1377
Type: CAZyme
Location: 1728890 - 1731169 (-)
Type: CAZyme
Location: 1728890 - 1731169 (-)
Gene ID: Rep_457_c_0_1378
Type: STP
Location: 1731208 - 1732218 (-)
Type: STP
Location: 1731208 - 1732218 (-)
Gene ID: Rep_457_c_0_1379
Type: TF
Location: 1732250 - 1732810 (-)
Type: TF
Location: 1732250 - 1732810 (-)
Gene ID: Rep_457_c_0_1380
Type: CAZyme
Location: 1732859 - 1735093 (-)
Type: CAZyme
Location: 1732859 - 1735093 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_1378 | vegan > omnivore | 2.06990 | 0.01606 |
| Rep_457_c_0_1378 | vegetarian > omnivore | 2.22874 | 0.00110 |