Cluster: Rep_457_CGC25
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 10
- Substrate:
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_1316 | 1617203 | 1617847 | + | 3.A.1.12.5 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_1317 | 1617860 | 1619065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1318 | 1619180 | 1621069 | + | GT51 |
| TF | Rep_457_c_0 | Rep_457_c_0_1319 | 1621223 | 1625326 | - | HTH_AraC |
| TC | Rep_457_c_0 | Rep_457_c_0_1320 | 1625913 | 1629065 | + | 1.B.14.6.1 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1321 | 1629089 | 1630777 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1322 | 1630793 | 1632196 | + | SGBP_B_XBD |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1323 | 1632229 | 1634547 | + | GH10 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1324 | 1634817 | 1636529 | + | GH35 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1325 | 1636567 | 1638237 | + | CE20 | CE20 |
| TC | Rep_457_c_0 | Rep_457_c_0_1326 | 1638311 | 1639807 | + | 2.A.2.3.4 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1327 | 1640025 | 1642673 | + | CBM91 | GH10 | GH43_12 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1328 | 1642893 | 1643870 | + | GH43_1 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1329 | 1643895 | 1644875 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1330 | 1644897 | 1646927 | + | GH67 |
| TC | Rep_457_c_0 | Rep_457_c_0_1331 | 1647290 | 1650385 | + | 1.B.14.6.2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_1332 | 1650398 | 1652086 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1333 | 1652299 | 1653381 | + | GH26 |
| TC | Rep_457_c_0 | Rep_457_c_0_1334 | 1653418 | 1654704 | + | 2.A.1.1.55 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1335 | 1654709 | 1656301 | + | CBM91 | GH43_11 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1336 | 1656320 | 1657378 | + | GH26 |
Gene ID: Rep_457_c_0_1316
Type: TC
Location: 1617203 - 1617847 (+)
Type: TC
Location: 1617203 - 1617847 (+)
Gene ID: Rep_457_c_0_1317
Type:
Location: 1617860 - 1619065 (+)
Type:
Location: 1617860 - 1619065 (+)
Gene ID: Rep_457_c_0_1318
Type: CAZyme
Location: 1619180 - 1621069 (+)
Type: CAZyme
Location: 1619180 - 1621069 (+)
Gene ID: Rep_457_c_0_1319
Type: TF
Location: 1621223 - 1625326 (-)
Type: TF
Location: 1621223 - 1625326 (-)
Gene ID: Rep_457_c_0_1320
Type: TC
Location: 1625913 - 1629065 (+)
Type: TC
Location: 1625913 - 1629065 (+)
Gene ID: Rep_457_c_0_1321
Type: pfam
Location: 1629089 - 1630777 (+)
Type: pfam
Location: 1629089 - 1630777 (+)
Gene ID: Rep_457_c_0_1322
Type: pfam
Location: 1630793 - 1632196 (+)
Type: pfam
Location: 1630793 - 1632196 (+)
Gene ID: Rep_457_c_0_1323
Type: CAZyme
Location: 1632229 - 1634547 (+)
Type: CAZyme
Location: 1632229 - 1634547 (+)
Gene ID: Rep_457_c_0_1324
Type: CAZyme
Location: 1634817 - 1636529 (+)
Type: CAZyme
Location: 1634817 - 1636529 (+)
Gene ID: Rep_457_c_0_1325
Type: CAZyme
Location: 1636567 - 1638237 (+)
Type: CAZyme
Location: 1636567 - 1638237 (+)
Gene ID: Rep_457_c_0_1326
Type: TC
Location: 1638311 - 1639807 (+)
Type: TC
Location: 1638311 - 1639807 (+)
Gene ID: Rep_457_c_0_1327
Type: CAZyme
Location: 1640025 - 1642673 (+)
Type: CAZyme
Location: 1640025 - 1642673 (+)
Gene ID: Rep_457_c_0_1328
Type: CAZyme
Location: 1642893 - 1643870 (+)
Type: CAZyme
Location: 1642893 - 1643870 (+)
Gene ID: Rep_457_c_0_1329
Type: pfam
Location: 1643895 - 1644875 (+)
Type: pfam
Location: 1643895 - 1644875 (+)
Gene ID: Rep_457_c_0_1330
Type: CAZyme
Location: 1644897 - 1646927 (+)
Type: CAZyme
Location: 1644897 - 1646927 (+)
Gene ID: Rep_457_c_0_1331
Type: TC
Location: 1647290 - 1650385 (+)
Type: TC
Location: 1647290 - 1650385 (+)
Gene ID: Rep_457_c_0_1332
Type: pfam
Location: 1650398 - 1652086 (+)
Type: pfam
Location: 1650398 - 1652086 (+)
Gene ID: Rep_457_c_0_1333
Type: CAZyme
Location: 1652299 - 1653381 (+)
Type: CAZyme
Location: 1652299 - 1653381 (+)
Gene ID: Rep_457_c_0_1334
Type: TC
Location: 1653418 - 1654704 (+)
Type: TC
Location: 1653418 - 1654704 (+)
Gene ID: Rep_457_c_0_1335
Type: CAZyme
Location: 1654709 - 1656301 (+)
Type: CAZyme
Location: 1654709 - 1656301 (+)
Gene ID: Rep_457_c_0_1336
Type: CAZyme
Location: 1656320 - 1657378 (+)
Type: CAZyme
Location: 1656320 - 1657378 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_1317 | vegan > omnivore | 1.38444 | 0.01606 |
| Rep_457_c_0_1317 | vegetarian > omnivore | 1.30294 | 0.00110 |
| Rep_457_c_0_1319 | vegan > omnivore | 1.36383 | 0.01606 |
| Rep_457_c_0_1319 | vegetarian > omnivore | 1.91973 | 0.00110 |
| Rep_457_c_0_1320 | vegan > omnivore | 1.09185 | 0.01606 |
| Rep_457_c_0_1320 | vegetarian > omnivore | 1.30274 | 0.00110 |
| Rep_457_c_0_1321 | vegan > omnivore | 1.71443 | 0.01606 |
| Rep_457_c_0_1321 | vegetarian > omnivore | 2.19254 | 0.00110 |
| Rep_457_c_0_1322 | vegetarian > omnivore | 1.90081 | 0.00110 |
| Rep_457_c_0_1322 | vegan > omnivore | 1.17235 | 0.01606 |
| Rep_457_c_0_1323 | vegetarian > omnivore | 1.53306 | 0.00110 |
| Rep_457_c_0_1323 | vegan > omnivore | 1.51003 | 0.01606 |
| Rep_457_c_0_1324 | vegetarian > vegan | 1.37244 | 0.02067 |
| Rep_457_c_0_1324 | vegetarian > omnivore | 1.63034 | 0.00110 |
| Rep_457_c_0_1325 | vegan > omnivore | 1.24651 | 0.01606 |
| Rep_457_c_0_1325 | vegetarian > omnivore | 2.65502 | 0.00110 |
| Rep_457_c_0_1325 | vegetarian > vegan | 1.40852 | 0.00822 |
| Rep_457_c_0_1327 | vegan > omnivore | 1.14232 | 0.01606 |
| Rep_457_c_0_1327 | vegetarian > vegan | 1.46007 | 0.02156 |
| Rep_457_c_0_1327 | vegetarian > omnivore | 2.60239 | 0.00110 |
| Rep_457_c_0_1329 | vegetarian > vegan | 1.34190 | 0.02067 |
| Rep_457_c_0_1329 | vegetarian > omnivore | 2.31530 | 0.00110 |
| Rep_457_c_0_1330 | vegetarian > vegan | 1.03831 | 0.02193 |
| Rep_457_c_0_1330 | vegetarian > omnivore | 1.23087 | 0.00110 |
| Rep_457_c_0_1331 | vegan > omnivore | 1.54120 | 0.01606 |
| Rep_457_c_0_1331 | vegetarian > omnivore | 2.36300 | 0.00110 |
| Rep_457_c_0_1332 | vegan > omnivore | 1.72786 | 0.01606 |
| Rep_457_c_0_1332 | vegetarian > omnivore | 2.55765 | 0.00110 |
| Rep_457_c_0_1333 | vegan > omnivore | 1.35990 | 0.01606 |
| Rep_457_c_0_1333 | vegetarian > omnivore | 1.55525 | 0.00110 |
| Rep_457_c_0_1334 | vegetarian > omnivore | 2.33435 | 0.00110 |
| Rep_457_c_0_1334 | vegan > omnivore | 2.20169 | 0.01606 |
| Rep_457_c_0_1335 | vegetarian > omnivore | 1.77349 | 0.00110 |
| Rep_457_c_0_1335 | vegan > omnivore | 1.10906 | 0.01606 |
| Rep_457_c_0_1336 | vegetarian > omnivore | 1.19376 | 0.00110 |
| Rep_457_c_0_1336 | vegan > omnivore | 1.02282 | 0.01606 |