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Cluster: Rep_457_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_457_c_0 Rep_457_c_0_1288 1576167 1578323 - GH97
TC Rep_457_c_0 Rep_457_c_0_1289 1578549 1578944 + 1.A.43.1.13
pfam Rep_457_c_0 Rep_457_c_0_1290 1579020 1580300 + Enolase_C | Enolase_N | MR_MLE_C
CAZyme Rep_457_c_0 Rep_457_c_0_1291 1580396 1582648 - GH3
CAZyme Rep_457_c_0 Rep_457_c_0_1292 1582659 1583774 - GH16_3
NULL(UNKNOWN) Rep_457_c_0 Rep_457_c_0_1293 1583776 1585179 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_457_c_0 Rep_457_c_0_1294 1585201 1586751 - SusD_RagB | SusD-like_3
TC Rep_457_c_0 Rep_457_c_0_1295 1586779 1589934 - 1.B.14.6.1
Gene ID: Rep_457_c_0_1288
Type: CAZyme
Location: 1576167 - 1578323 (-)
Gene ID: Rep_457_c_0_1289
Type: TC
Location: 1578549 - 1578944 (+)
Gene ID: Rep_457_c_0_1290
Type: pfam
Location: 1579020 - 1580300 (+)
Gene ID: Rep_457_c_0_1291
Type: CAZyme
Location: 1580396 - 1582648 (-)
Gene ID: Rep_457_c_0_1292
Type: CAZyme
Location: 1582659 - 1583774 (-)
Gene ID: Rep_457_c_0_1293
Type:
Location: 1583776 - 1585179 (-)
Gene ID: Rep_457_c_0_1294
Type: pfam
Location: 1585201 - 1586751 (-)
Gene ID: Rep_457_c_0_1295
Type: TC
Location: 1586779 - 1589934 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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