Cluster: Rep_457_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_1160 | 1414392 | 1417406 | + | 1.B.14.6.1 |
| TC | Rep_457_c_0 | Rep_457_c_0_1161 | 1417434 | 1419164 | + | 8.A.46.1.1 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_1162 | 1419388 | 1420260 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1163 | 1420279 | 1421670 | + | GH27 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1164 | 1421671 | 1422093 | + | CBM35 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_1165 | 1422090 | 1424117 | + | GH97 |
| TC | Rep_457_c_0 | Rep_457_c_0_1166 | 1424071 | 1425420 | - | 2.A.66.1.33 |
Gene ID: Rep_457_c_0_1160
Type: TC
Location: 1414392 - 1417406 (+)
Type: TC
Location: 1414392 - 1417406 (+)
Gene ID: Rep_457_c_0_1161
Type: TC
Location: 1417434 - 1419164 (+)
Type: TC
Location: 1417434 - 1419164 (+)
Gene ID: Rep_457_c_0_1162
Type:
Location: 1419388 - 1420260 (+)
Type:
Location: 1419388 - 1420260 (+)
Gene ID: Rep_457_c_0_1163
Type: CAZyme
Location: 1420279 - 1421670 (+)
Type: CAZyme
Location: 1420279 - 1421670 (+)
Gene ID: Rep_457_c_0_1164
Type: CAZyme
Location: 1421671 - 1422093 (+)
Type: CAZyme
Location: 1421671 - 1422093 (+)
Gene ID: Rep_457_c_0_1165
Type: CAZyme
Location: 1422090 - 1424117 (+)
Type: CAZyme
Location: 1422090 - 1424117 (+)
Gene ID: Rep_457_c_0_1166
Type: TC
Location: 1424071 - 1425420 (-)
Type: TC
Location: 1424071 - 1425420 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_1160 | vegan > omnivore | 1.81212 | 0.01606 |
| Rep_457_c_0_1160 | vegetarian > omnivore | 2.01442 | 0.00110 |
| Rep_457_c_0_1161 | vegan > omnivore | 1.23549 | 0.01606 |
| Rep_457_c_0_1161 | vegetarian > omnivore | 1.54895 | 0.00110 |
| Rep_457_c_0_1162 | vegan > omnivore | 1.62003 | 0.01606 |
| Rep_457_c_0_1162 | vegetarian > omnivore | 1.71547 | 0.00110 |
| Rep_457_c_0_1164 | vegan > omnivore | 1.39298 | 0.01606 |
| Rep_457_c_0_1165 | vegan > omnivore | 1.48044 | 0.01606 |
| Rep_457_c_0_1165 | vegetarian > omnivore | 2.03476 | 0.00110 |