Cluster: Rep_457_CGC111
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_457
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_457_c_0 | Rep_457_c_0_4862 | 6498412 | 6501105 | - | 1.B.14.6.14 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4863 | 6501143 | 6502003 | + | GT2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_4864 | 6502026 | 6503192 | - | Epimerase_2 |
| TC | Rep_457_c_0 | Rep_457_c_0_4865 | 6503251 | 6503883 | + | 1.A.62.2.1 |
Gene ID: Rep_457_c_0_4862
Type: TC
Location: 6498412 - 6501105 (-)
Type: TC
Location: 6498412 - 6501105 (-)
Gene ID: Rep_457_c_0_4863
Type: CAZyme
Location: 6501143 - 6502003 (+)
Type: CAZyme
Location: 6501143 - 6502003 (+)
Gene ID: Rep_457_c_0_4864
Type: pfam
Location: 6502026 - 6503192 (-)
Type: pfam
Location: 6502026 - 6503192 (-)
Gene ID: Rep_457_c_0_4865
Type: TC
Location: 6503251 - 6503883 (+)
Type: TC
Location: 6503251 - 6503883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_4863 | vegan > omnivore | 1.45240 | 0.01606 |
| Rep_457_c_0_4863 | vegetarian > omnivore | 2.57465 | 0.00110 |
| Rep_457_c_0_4863 | vegetarian > vegan | 1.12225 | 0.02193 |