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Cluster: Rep_457_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_457_c_0 Rep_457_c_0_786 967198 969159 - CE19
CAZyme Rep_457_c_0 Rep_457_c_0_787 969178 970536 - GH28
CAZyme Rep_457_c_0 Rep_457_c_0_788 970548 973358 - CBM67 | GH78
CAZyme Rep_457_c_0 Rep_457_c_0_789 973389 976712 - GH142 | GH143
CAZyme Rep_457_c_0 Rep_457_c_0_790 976734 977663 - GH43_18
pfam Rep_457_c_0 Rep_457_c_0_791 977847 978515 - DUF3826
CAZyme Rep_457_c_0 Rep_457_c_0_792 978518 980248 - PL1_2
pfam Rep_457_c_0 Rep_457_c_0_793 980329 980994 - DUF3826
pfam Rep_457_c_0 Rep_457_c_0_794 981149 983428 - SusD_RagB | SusD-like_3
TC Rep_457_c_0 Rep_457_c_0_795 983462 986962 - 1.B.14.6.1
Gene ID: Rep_457_c_0_786
Type: CAZyme
Location: 967198 - 969159 (-)
Gene ID: Rep_457_c_0_787
Type: CAZyme
Location: 969178 - 970536 (-)
Gene ID: Rep_457_c_0_788
Type: CAZyme
Location: 970548 - 973358 (-)
Gene ID: Rep_457_c_0_789
Type: CAZyme
Location: 973389 - 976712 (-)
Gene ID: Rep_457_c_0_790
Type: CAZyme
Location: 976734 - 977663 (-)
Gene ID: Rep_457_c_0_791
Type: pfam
Location: 977847 - 978515 (-)
Gene ID: Rep_457_c_0_792
Type: CAZyme
Location: 978518 - 980248 (-)
Gene ID: Rep_457_c_0_793
Type: pfam
Location: 980329 - 980994 (-)
Gene ID: Rep_457_c_0_794
Type: pfam
Location: 981149 - 983428 (-)
Gene ID: Rep_457_c_0_795
Type: TC
Location: 983462 - 986962 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_457_c_0_786 vegan > omnivore 1.06346 0.01606
Rep_457_c_0_786 vegetarian > omnivore 1.30664 0.00110

🧭 Explore Read Mapping of CGC

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