Cluster: Rep_457_CGC109
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_457
- CGC Family ID: CGCFAM_11292
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4774 | 6382588 | 6383718 | + | GT4 |
| TC | Rep_457_c_0 | Rep_457_c_0_4775 | 6384406 | 6385422 | + | 9.B.18.2.1 |
| pfam | Rep_457_c_0 | Rep_457_c_0_4776 | 6385410 | 6386540 | + | Epimerase_2 |
| pfam | Rep_457_c_0 | Rep_457_c_0_4777 | 6386560 | 6387441 | + | Epimerase | RmlD_sub_bind |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4778 | 6387494 | 6388717 | + | GT4 |
| pfam | Rep_457_c_0 | Rep_457_c_0_4779 | 6388913 | 6389494 | + | Hexapep | Hexapep_2 |
| CAZyme | Rep_457_c_0 | Rep_457_c_0_4780 | 6389514 | 6390368 | + | CE4 |
| pfam | Rep_457_c_0 | Rep_457_c_0_4781 | 6390376 | 6391410 | + | 3Beta_HSD | Epimerase |
| pfam | Rep_457_c_0 | Rep_457_c_0_4782 | 6391432 | 6392388 | + | Glycos_transf_4 |
| TC | Rep_457_c_0 | Rep_457_c_0_4783 | 6392594 | 6394528 | + | 2.A.21.9.1 |
| sulfatase | Rep_457_c_0 | Rep_457_c_0_4784 | 6394538 | 6396283 | + | S1_14 |
| NULL(UNKNOWN) | Rep_457_c_0 | Rep_457_c_0_4785 | 6396327 | 6396668 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_457_c_0 | Rep_457_c_0_4786 | 6396870 | 6399191 | + | 1.B.14.1.4 |
Gene ID: Rep_457_c_0_4774
Type: CAZyme
Location: 6382588 - 6383718 (+)
Type: CAZyme
Location: 6382588 - 6383718 (+)
Gene ID: Rep_457_c_0_4775
Type: TC
Location: 6384406 - 6385422 (+)
Type: TC
Location: 6384406 - 6385422 (+)
Gene ID: Rep_457_c_0_4776
Type: pfam
Location: 6385410 - 6386540 (+)
Type: pfam
Location: 6385410 - 6386540 (+)
Gene ID: Rep_457_c_0_4777
Type: pfam
Location: 6386560 - 6387441 (+)
Type: pfam
Location: 6386560 - 6387441 (+)
Gene ID: Rep_457_c_0_4778
Type: CAZyme
Location: 6387494 - 6388717 (+)
Type: CAZyme
Location: 6387494 - 6388717 (+)
Gene ID: Rep_457_c_0_4779
Type: pfam
Location: 6388913 - 6389494 (+)
Type: pfam
Location: 6388913 - 6389494 (+)
Gene ID: Rep_457_c_0_4780
Type: CAZyme
Location: 6389514 - 6390368 (+)
Type: CAZyme
Location: 6389514 - 6390368 (+)
Gene ID: Rep_457_c_0_4781
Type: pfam
Location: 6390376 - 6391410 (+)
Type: pfam
Location: 6390376 - 6391410 (+)
Gene ID: Rep_457_c_0_4782
Type: pfam
Location: 6391432 - 6392388 (+)
Type: pfam
Location: 6391432 - 6392388 (+)
Gene ID: Rep_457_c_0_4783
Type: TC
Location: 6392594 - 6394528 (+)
Type: TC
Location: 6392594 - 6394528 (+)
Gene ID: Rep_457_c_0_4784
Type: sulfatase
Location: 6394538 - 6396283 (+)
Type: sulfatase
Location: 6394538 - 6396283 (+)
Gene ID: Rep_457_c_0_4785
Type:
Location: 6396327 - 6396668 (+)
Type:
Location: 6396327 - 6396668 (+)
Gene ID: Rep_457_c_0_4786
Type: TC
Location: 6396870 - 6399191 (+)
Type: TC
Location: 6396870 - 6399191 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides cellulosilyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_457_c_0_4785 | vegan > omnivore | 1.59826 | 0.01606 |
| Rep_457_c_0_4785 | vegetarian > omnivore | 2.47510 | 0.00110 |