Cluster: Rep_453_CGC71
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_453
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_453_c_328 | Rep_453_c_328_1 | 59 | 2038 | - | GH63 |
| CAZyme | Rep_453_c_328 | Rep_453_c_328_2 | 2293 | 5460 | - | GH2 |
| TC | Rep_453_c_328 | Rep_453_c_328_3 | 5479 | 6081 | - | 2.A.124.1.2 |
| TC | Rep_453_c_328 | Rep_453_c_328_4 | 6078 | 6359 | - | 2.A.124.1.2 |
| TC | Rep_453_c_328 | Rep_453_c_328_5 | 6468 | 8027 | - | 8.A.46.1.4 |
| TC | Rep_453_c_328 | Rep_453_c_328_6 | 8049 | 11201 | - | 1.B.14.6.1 |
Gene ID: Rep_453_c_328_1
Type: CAZyme
Location: 59 - 2038 (-)
Type: CAZyme
Location: 59 - 2038 (-)
Gene ID: Rep_453_c_328_2
Type: CAZyme
Location: 2293 - 5460 (-)
Type: CAZyme
Location: 2293 - 5460 (-)
Gene ID: Rep_453_c_328_3
Type: TC
Location: 5479 - 6081 (-)
Type: TC
Location: 5479 - 6081 (-)
Gene ID: Rep_453_c_328_4
Type: TC
Location: 6078 - 6359 (-)
Type: TC
Location: 6078 - 6359 (-)
Gene ID: Rep_453_c_328_5
Type: TC
Location: 6468 - 8027 (-)
Type: TC
Location: 6468 - 8027 (-)
Gene ID: Rep_453_c_328_6
Type: TC
Location: 8049 - 11201 (-)
Type: TC
Location: 8049 - 11201 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.