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Cluster: Rep_453_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_453_c_254 Rep_453_c_254_7 4945 6123 + 2.A.37.2.6
TC Rep_453_c_254 Rep_453_c_254_8 6292 7647 + 2.A.33.1.2
STP Rep_453_c_254 Rep_453_c_254_9 7740 10022 - HATPase_c | HisKA
TC Rep_453_c_254 Rep_453_c_254_10 10181 11803 - 2.A.3.7.1
pfam Rep_453_c_254 Rep_453_c_254_11 11992 12717 + Ion_trans | Ion_trans_2
pfam Rep_453_c_254 Rep_453_c_254_12 12792 15464 + Transglut_core | Transglut_core
TC Rep_453_c_254 Rep_453_c_254_13 15570 16430 - 9.B.158.1.1
CAZyme Rep_453_c_254 Rep_453_c_254_14 16434 17756 - GH29
Gene ID: Rep_453_c_254_7
Type: TC
Location: 4945 - 6123 (+)
Gene ID: Rep_453_c_254_8
Type: TC
Location: 6292 - 7647 (+)
Gene ID: Rep_453_c_254_9
Type: STP
Location: 7740 - 10022 (-)
Gene ID: Rep_453_c_254_10
Type: TC
Location: 10181 - 11803 (-)
Gene ID: Rep_453_c_254_11
Type: pfam
Location: 11992 - 12717 (+)
Gene ID: Rep_453_c_254_12
Type: pfam
Location: 12792 - 15464 (+)
Gene ID: Rep_453_c_254_13
Type: TC
Location: 15570 - 16430 (-)
Gene ID: Rep_453_c_254_14
Type: CAZyme
Location: 16434 - 17756 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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