Cluster: Rep_453_CGC16
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_453
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_453_c_86 | Rep_453_c_86_31 | 44364 | 46082 | - | GT83 |
| pfam | Rep_453_c_86 | Rep_453_c_86_32 | 46168 | 46536 | + | GtrA_DPMS_TM |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_33 | 46579 | 47526 | + | GT2 |
| pfam | Rep_453_c_86 | Rep_453_c_86_34 | 47546 | 49522 | - | Sulfatase |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_35 | 49546 | 50391 | - | GT11 |
| NULL(UNKNOWN) | Rep_453_c_86 | Rep_453_c_86_36 | 50461 | 50643 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_453_c_86 | Rep_453_c_86_37 | 50785 | 50994 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_453_c_86 | Rep_453_c_86_38 | 51858 | 53336 | + | 1.C.39.13.2 |
| TC | Rep_453_c_86 | Rep_453_c_86_39 | 53445 | 54905 | + | 1.C.39.13.2 |
| TC | Rep_453_c_86 | Rep_453_c_86_40 | 55019 | 56500 | + | 1.C.39.13.2 |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_41 | 57243 | 58163 | - | GT2 |
| pfam | Rep_453_c_86 | Rep_453_c_86_42 | 58833 | 59372 | - | Hexapep | Hexapep_2 |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_43 | 59430 | 60671 | - | GT4 |
| pfam | Rep_453_c_86 | Rep_453_c_86_44 | 60844 | 61926 | + | Glyco_tran_WbsX |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_45 | 61999 | 62895 | - | GT14 |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_46 | 62895 | 63794 | - | GT2 |
| CAZyme | Rep_453_c_86 | Rep_453_c_86_47 | 63868 | 64767 | - | GT2 |
Gene ID: Rep_453_c_86_31
Type: CAZyme
Location: 44364 - 46082 (-)
Type: CAZyme
Location: 44364 - 46082 (-)
Gene ID: Rep_453_c_86_32
Type: pfam
Location: 46168 - 46536 (+)
Type: pfam
Location: 46168 - 46536 (+)
Gene ID: Rep_453_c_86_33
Type: CAZyme
Location: 46579 - 47526 (+)
Type: CAZyme
Location: 46579 - 47526 (+)
Gene ID: Rep_453_c_86_34
Type: pfam
Location: 47546 - 49522 (-)
Type: pfam
Location: 47546 - 49522 (-)
Gene ID: Rep_453_c_86_35
Type: CAZyme
Location: 49546 - 50391 (-)
Type: CAZyme
Location: 49546 - 50391 (-)
Gene ID: Rep_453_c_86_36
Type:
Location: 50461 - 50643 (+)
Type:
Location: 50461 - 50643 (+)
Gene ID: Rep_453_c_86_37
Type:
Location: 50785 - 50994 (+)
Type:
Location: 50785 - 50994 (+)
Gene ID: Rep_453_c_86_38
Type: TC
Location: 51858 - 53336 (+)
Type: TC
Location: 51858 - 53336 (+)
Gene ID: Rep_453_c_86_39
Type: TC
Location: 53445 - 54905 (+)
Type: TC
Location: 53445 - 54905 (+)
Gene ID: Rep_453_c_86_40
Type: TC
Location: 55019 - 56500 (+)
Type: TC
Location: 55019 - 56500 (+)
Gene ID: Rep_453_c_86_41
Type: CAZyme
Location: 57243 - 58163 (-)
Type: CAZyme
Location: 57243 - 58163 (-)
Gene ID: Rep_453_c_86_42
Type: pfam
Location: 58833 - 59372 (-)
Type: pfam
Location: 58833 - 59372 (-)
Gene ID: Rep_453_c_86_43
Type: CAZyme
Location: 59430 - 60671 (-)
Type: CAZyme
Location: 59430 - 60671 (-)
Gene ID: Rep_453_c_86_44
Type: pfam
Location: 60844 - 61926 (+)
Type: pfam
Location: 60844 - 61926 (+)
Gene ID: Rep_453_c_86_45
Type: CAZyme
Location: 61999 - 62895 (-)
Type: CAZyme
Location: 61999 - 62895 (-)
Gene ID: Rep_453_c_86_46
Type: CAZyme
Location: 62895 - 63794 (-)
Type: CAZyme
Location: 62895 - 63794 (-)
Gene ID: Rep_453_c_86_47
Type: CAZyme
Location: 63868 - 64767 (-)
Type: CAZyme
Location: 63868 - 64767 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.