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Cluster: Rep_447_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_447_c_50 Rep_447_c_50_5 4513 5463 - GT2
pfam Rep_447_c_50 Rep_447_c_50_6 5460 5840 - GtrA_DPMS_TM
sulfatase Rep_447_c_50 Rep_447_c_50_7 5853 7829 - S1_74
CAZyme Rep_447_c_50 Rep_447_c_50_8 7826 9547 - GT83
NULL(UNKNOWN) Rep_447_c_50 Rep_447_c_50_9 9610 9729 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_447_c_50 Rep_447_c_50_10 9719 12085 - GH35
pfam Rep_447_c_50 Rep_447_c_50_11 12259 13419 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
TC Rep_447_c_50 Rep_447_c_50_12 13458 14696 - 2.A.1.7.2
Gene ID: Rep_447_c_50_5
Type: CAZyme
Location: 4513 - 5463 (-)
Gene ID: Rep_447_c_50_6
Type: pfam
Location: 5460 - 5840 (-)
Gene ID: Rep_447_c_50_7
Type: sulfatase
Location: 5853 - 7829 (-)
Gene ID: Rep_447_c_50_8
Type: CAZyme
Location: 7826 - 9547 (-)
Gene ID: Rep_447_c_50_9
Type:
Location: 9610 - 9729 (+)
Gene ID: Rep_447_c_50_10
Type: CAZyme
Location: 9719 - 12085 (-)
Gene ID: Rep_447_c_50_11
Type: pfam
Location: 12259 - 13419 (-)
Gene ID: Rep_447_c_50_12
Type: TC
Location: 13458 - 14696 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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