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Cluster: Rep_447_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_447_c_24 Rep_447_c_24_26 30667 31815 - GT4
NULL(UNKNOWN) Rep_447_c_24 Rep_447_c_24_27 31815 32714 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_447_c_24 Rep_447_c_24_28 32720 34153 - 2.A.50.2.1
CAZyme Rep_447_c_24 Rep_447_c_24_29 34195 35151 - GT2
pfam Rep_447_c_24 Rep_447_c_24_30 35339 36532 + AAA_14
pfam Rep_447_c_24 Rep_447_c_24_31 36647 37795 - PS_pyruv_trans
CAZyme Rep_447_c_24 Rep_447_c_24_32 37798 38688 - GT11
CAZyme Rep_447_c_24 Rep_447_c_24_33 38698 39882 - GT4
Gene ID: Rep_447_c_24_26
Type: CAZyme
Location: 30667 - 31815 (-)
Gene ID: Rep_447_c_24_27
Type:
Location: 31815 - 32714 (-)
Gene ID: Rep_447_c_24_28
Type: TC
Location: 32720 - 34153 (-)
Gene ID: Rep_447_c_24_29
Type: CAZyme
Location: 34195 - 35151 (-)
Gene ID: Rep_447_c_24_30
Type: pfam
Location: 35339 - 36532 (+)
Gene ID: Rep_447_c_24_31
Type: pfam
Location: 36647 - 37795 (-)
Gene ID: Rep_447_c_24_32
Type: CAZyme
Location: 37798 - 38688 (-)
Gene ID: Rep_447_c_24_33
Type: CAZyme
Location: 38698 - 39882 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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