Cluster: Rep_439_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_439
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_439_c_3 | Rep_439_c_3_298 | 373025 | 374605 | + | 2.A.17.1.7 |
| NULL(UNKNOWN) | Rep_439_c_3 | Rep_439_c_3_299 | 374687 | 376255 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_439_c_3 | Rep_439_c_3_300 | 376270 | 377304 | - | 8.A.1.1.1 |
| pfam | Rep_439_c_3 | Rep_439_c_3_301 | 377353 | 378663 | - | OEP | OEP |
| TF | Rep_439_c_3 | Rep_439_c_3_302 | 378860 | 379657 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_439_c_3 | Rep_439_c_3_303 | 380049 | 381815 | - | GH110 |
Gene ID: Rep_439_c_3_298
Type: TC
Location: 373025 - 374605 (+)
Type: TC
Location: 373025 - 374605 (+)
Gene ID: Rep_439_c_3_299
Type:
Location: 374687 - 376255 (-)
Type:
Location: 374687 - 376255 (-)
Gene ID: Rep_439_c_3_300
Type: TC
Location: 376270 - 377304 (-)
Type: TC
Location: 376270 - 377304 (-)
Gene ID: Rep_439_c_3_301
Type: pfam
Location: 377353 - 378663 (-)
Type: pfam
Location: 377353 - 378663 (-)
Gene ID: Rep_439_c_3_302
Type: TF
Location: 378860 - 379657 (+)
Type: TF
Location: 378860 - 379657 (+)
Gene ID: Rep_439_c_3_303
Type: CAZyme
Location: 380049 - 381815 (-)
Type: CAZyme
Location: 380049 - 381815 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp905215575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.