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Cluster: Rep_439_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_439_c_7 Rep_439_c_7_69 98122 100608 + GT51
STP Rep_439_c_7 Rep_439_c_7_70 100621 102645 + TPR_1
NULL(UNKNOWN) Rep_439_c_7 Rep_439_c_7_71 103096 106050 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_439_c_7 Rep_439_c_7_72 106050 109457 + 1.B.14.6.1
TC Rep_439_c_7 Rep_439_c_7_73 109469 111223 + 8.A.46.1.4
NULL(UNKNOWN) Rep_439_c_7 Rep_439_c_7_74 111230 113398 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_439_c_7 Rep_439_c_7_75 113419 115137 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_439_c_7 Rep_439_c_7_76 115164 118571 + 1.B.14.6.1
Gene ID: Rep_439_c_7_69
Type: CAZyme
Location: 98122 - 100608 (+)
Gene ID: Rep_439_c_7_70
Type: STP
Location: 100621 - 102645 (+)
Gene ID: Rep_439_c_7_71
Type:
Location: 103096 - 106050 (+)
Gene ID: Rep_439_c_7_72
Type: TC
Location: 106050 - 109457 (+)
Gene ID: Rep_439_c_7_73
Type: TC
Location: 109469 - 111223 (+)
Gene ID: Rep_439_c_7_74
Type:
Location: 111230 - 113398 (+)
Gene ID: Rep_439_c_7_75
Type:
Location: 113419 - 115137 (+)
Gene ID: Rep_439_c_7_76
Type: TC
Location: 115164 - 118571 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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