Cluster: Rep_439_CGC52
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_439
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_439_c_4 | Rep_439_c_4_1489 | 1848849 | 1850348 | + | 2.A.38.1.1 |
| TC | Rep_439_c_4 | Rep_439_c_4_1490 | 1850502 | 1851872 | - | 2.A.66.1.33 |
| TC | Rep_439_c_4 | Rep_439_c_4_1491 | 1852043 | 1853632 | - | 3.D.10.1.4 |
| pfam | Rep_439_c_4 | Rep_439_c_4_1492 | 1854010 | 1857381 | - | TPR_6 | TPR_8 | TPR_8 | DUF5107 |
| TC | Rep_439_c_4 | Rep_439_c_4_1493 | 1857405 | 1858793 | - | 2.A.1.1.55 |
| CAZyme | Rep_439_c_4 | Rep_439_c_4_1494 | 1858829 | 1861612 | - | GH2 |
Gene ID: Rep_439_c_4_1489
Type: TC
Location: 1848849 - 1850348 (+)
Type: TC
Location: 1848849 - 1850348 (+)
Gene ID: Rep_439_c_4_1490
Type: TC
Location: 1850502 - 1851872 (-)
Type: TC
Location: 1850502 - 1851872 (-)
Gene ID: Rep_439_c_4_1491
Type: TC
Location: 1852043 - 1853632 (-)
Type: TC
Location: 1852043 - 1853632 (-)
Gene ID: Rep_439_c_4_1492
Type: pfam
Location: 1854010 - 1857381 (-)
Type: pfam
Location: 1854010 - 1857381 (-)
Gene ID: Rep_439_c_4_1493
Type: TC
Location: 1857405 - 1858793 (-)
Type: TC
Location: 1857405 - 1858793 (-)
Gene ID: Rep_439_c_4_1494
Type: CAZyme
Location: 1858829 - 1861612 (-)
Type: CAZyme
Location: 1858829 - 1861612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp905215575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.