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Cluster: Rep_439_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_439_c_4 Rep_439_c_4_1152 1412650 1415646 - 1.C.105.2.12
pfam Rep_439_c_4 Rep_439_c_4_1153 1415781 1416884 + DHQ_synthase | DHQS_C
TC Rep_439_c_4 Rep_439_c_4_1154 1416971 1418359 - 2.A.6.2.20
TC Rep_439_c_4 Rep_439_c_4_1155 1418363 1421494 - 2.A.6.2.22
TC Rep_439_c_4 Rep_439_c_4_1156 1421497 1422630 - 2.A.6.2.45
TC Rep_439_c_4 Rep_439_c_4_1157 1422822 1423832 + 9.B.33.1.1
TF Rep_439_c_4 Rep_439_c_4_1158 1423829 1424536 + LytTR
CAZyme Rep_439_c_4 Rep_439_c_4_1159 1424761 1425546 + GH16_3
Gene ID: Rep_439_c_4_1152
Type: TC
Location: 1412650 - 1415646 (-)
Gene ID: Rep_439_c_4_1153
Type: pfam
Location: 1415781 - 1416884 (+)
Gene ID: Rep_439_c_4_1154
Type: TC
Location: 1416971 - 1418359 (-)
Gene ID: Rep_439_c_4_1155
Type: TC
Location: 1418363 - 1421494 (-)
Gene ID: Rep_439_c_4_1156
Type: TC
Location: 1421497 - 1422630 (-)
Gene ID: Rep_439_c_4_1157
Type: TC
Location: 1422822 - 1423832 (+)
Gene ID: Rep_439_c_4_1158
Type: TF
Location: 1423829 - 1424536 (+)
Gene ID: Rep_439_c_4_1159
Type: CAZyme
Location: 1424761 - 1425546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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